RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TRAV1-1A0A0B4J248 108 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 A0A0G2JMM0 328 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 A0A1W2PPB8 328 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 A0A1W2PRS3 328 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 KIR3DP1A8MWS1 328 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 ZNF587BE7ETH6 402 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 CCL21O00585 134 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 DEGS1O15121 323 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 MRPL33O75394 65 aaKnown RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 NEURL1O76050 574 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 HBE1P02100 147 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 SMIM6P0DI80 62 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 PRKACAP17612 351 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 AGAP20933 346 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 GRNP28799 593 aaKnown RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 GNRHRP30968 328 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 APLNRP35414 380 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 LHX2P50458 406 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 ARHGDIBP52566 201 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 CLDN18P56856 261 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 RBPJQ06330 500 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 IL24Q13007 206 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 SPINK14Q6IE38 97 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 SLC25A26Q70HW3 274 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 CALHM1Q8IU99 346 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 SELENOHQ8IZQ5 122 aaKnown RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 ZNF561Q8N587 486 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 BOLLQ8N9W6 283 aaKnown RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 PIGCQ92535 297 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 RBMXL1Q96E39 390 aaKnown RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 TP53RKQ96S44 253 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 USB1Q9BQ65 265 aaKnown RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 PAPOLGQ9BWT3 736 aaKnown RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 PARD6GQ9BYG4 376 aaPredicted RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 SLC35B3Q9H1N7 401 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 TMEM231Q9H6L2 316 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 SH3BGRL2Q9UJC5 107 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 NOSIPQ9Y314 301 aaKnown RBP9.19□□□□□ -0.94
RTN3-201ENST00000338850 MMP24Q9Y5R2 645 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 APCP25054 2843 aa9.19□□□□□ -0.94
RTN3-201ENST00000338850 A0A087WWC5 75 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 C1orf196B1AJZ1 125 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 UBE2CO00762 179 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 DFFBO76075 338 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 OR7C1O76099 320 aaPredicted RBP9.18□□□□□ -0.94
RTN3-201ENST00000338850 SCGB1D2O95969 90 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 SP1P08047 785 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 OR8U8P0C7N1 319 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 CD46P15529 392 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 GDF1P27539 372 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 CD200P41217 278 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 FXYD4P59646 89 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 PRDX4Q13162 271 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 CLINT1Q14677 625 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 MSMO1Q15800 293 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 C3AR1Q16581 482 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 PHLDA2Q53GA4 152 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 WIPI1Q5MNZ9 446 aaPredicted RBP9.18□□□□□ -0.94
RTN3-201ENST00000338850 TSPO2Q5TGU0 170 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 MRPL21Q7Z2W9 205 aaKnown RBP9.18□□□□□ -0.94
RTN3-201ENST00000338850 MRGPRGQ86SM5 289 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 FOXRED2Q8IWF2 684 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 CMTM1Q8IZ96 169 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 GAPTQ8N292 157 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 ZNF808Q8N4W9 903 aaPredicted RBP9.18□□□□□ -0.94
RTN3-201ENST00000338850 ZNF565Q8N9K5 539 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 TMEM178AQ8NBL3 297 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 OR56B2PQ8NGI1 322 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 OR52M1Q8NGK5 317 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 OR5L1Q8NGL2 311 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 FGFBP3Q8TAT2 258 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 SFT2D1Q8WV19 159 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
RTN3-201ENST00000338850 HIST1H2BAQ96A08 127 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 AKR1E2Q96JD6 320 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 ADAT1Q9BUB4 502 aaKnown RBP9.18□□□□□ -0.94
RTN3-201ENST00000338850 SAV1Q9H4B6 383 aaPredicted RBP9.18□□□□□ -0.94
RTN3-201ENST00000338850 DEPPQ9NTK1 212 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 LRFN1Q9P244 771 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 RNF150Q9ULK6 438 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 ZNF835Q9Y2P0 537 aa9.18□□□□□ -0.94
RTN3-201ENST00000338850 A0A1B0GU03 582 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 SLC22A20A6NK97 555 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 C9JQL5 133 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 G3V3Y1 287 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 TRAPPC2LH3BP13 241 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 NME2P1O60361 137 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 SYNGR4O95473 234 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 ACAA1P09110 424 aaPredicted RBP9.17□□□□□ -0.94
RTN3-201ENST00000338850 RFPL3SP0C7P2 107 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 CASP6P55212 293 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 TAS2R30P59541 319 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 HLA-DRB3P79483 266 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 ARF1P84077 181 aaKnown RBP9.17□□□□□ -0.94
RTN3-201ENST00000338850 ADORA2A-AS1P86434 159 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 PMS2P11Q13670 270 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 HABP2Q14520 560 aaPredicted RBP9.17□□□□□ -0.94
RTN3-201ENST00000338850 SP6Q3SY56 376 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 HIKESHIQ53FT3 197 aa9.17□□□□□ -0.94
RTN3-201ENST00000338850 KRTCAP3Q53RY4 240 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms