RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 IGHG3P01860 377 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 MMP7P09237 267 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-201ENST00000334136 CD200P41217 278 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 FHITP49789 147 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 GGNQ86UU5 652 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 OR10C1Q96KK4 312 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 OR51I2Q9H344 312 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 NAA60Q9H7X0 242 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 MSGN1A6NI15 193 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 K7EM74 188 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 MT-CO2P00403 227 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 CATR1Q13166 79 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 MPV17LQ2QL34 196 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 PRR30Q53SZ7 412 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-201ENST00000334136 DHRS11Q6UWP2 260 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 Q6ZT83 130 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 LRP11Q86VZ4 500 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 ZNF439Q8NDP4 499 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 PPP1R35Q8TAP8 253 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 DYRK2Q92630 601 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 PSENENQ9NZ42 101 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
HDAC6-201ENST00000334136 E9PLN8 166 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 H3BQ15 152 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 DVL1O14640 695 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 METTL15P1P0C7V9 234 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 FGF7P21781 194 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 DLK1P80370 383 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 TMEM68Q96MH6 324 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 VKORC1Q9BQB6 163 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 FAM103A1Q9BTL3 118 aaKnown RBP10.18□□□□□ -0.78
HDAC6-201ENST00000334136 SEC14L6B5MCN3 397 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 SSX8Q7RTT4 187 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 TMEM45BQ96B21 275 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 PECRQ9BY49 303 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 B3GAT1Q9P2W7 334 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 TMED3Q9Y3Q3 217 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 DEGS1O15121 323 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 CEACAM4O75871 244 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 TTRP02766 147 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 NTF3P20783 257 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 ENDOGQ14249 297 aaKnown RBP10.18□□□□□ -0.78
HDAC6-201ENST00000334136 RTL8AQ9BWD3 113 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 HSF4Q9ULV5 492 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 IGLV1-36A0A0B4J1U3 117 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 UBE2L5PA0A1B0GUS4 154 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 LINC00587B1AMM8 73 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 GEMIN2O14893 280 aaKnown RBP10.18□□□□□ -0.78
HDAC6-201ENST00000334136 FUT3P21217 361 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 THBS4P35443 961 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 B3GALT5-AS1P59052 145 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 NAAAQ02083 359 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 DHODHQ02127 395 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 OR1K1Q8NGR3 316 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 RCC2Q9P258 522 aaKnown RBP10.18□□□□□ -0.78
HDAC6-201ENST00000334136 FZR1Q9UM11 496 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 NPTNQ9Y639 398 aa10.18□□□□□ -0.78
HDAC6-201ENST00000334136 HEATR1Q9H583 2144 aaKnown RBP10.18□□□□□ -0.78
HDAC6-201ENST00000334136 FER1L5A0AVI2 2057 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 CLEC18AA5D8T8 446 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 MPTX1A8MV57 137 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 TGOLN2O43493 480 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 DHRS3O75911 302 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 CD1AP06126 327 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-201ENST00000334136 GABRA2P47869 451 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 MMP16P51512 607 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 ERVS71-1P61550 626 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 PPP1CBP62140 327 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 HLA-DRB3P79483 266 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 PMS2P11Q13670 270 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 EDDM3AQ14507 147 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 ZNF260Q3ZCT1 412 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 ABLIM2Q6H8Q1 611 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 DOLPP1Q86YN1 238 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 CLEC18CQ8NCF0 446 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 RHOVQ96L33 236 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 UHRF2Q96PU4 802 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 LINC00470Q9BZP3 86 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 PRDM14Q9GZV8 571 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 PARP11Q9NR21 331 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 POMT1Q9Y6A1 747 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 SIRPB1O00241 398 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 KRASP01116 189 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 MGST1P10620 155 aaKnown RBP10.17□□□□□ -0.78
HDAC6-201ENST00000334136 FAM27E3Q08E93 113 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 ALKBH6Q3KRA9 238 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 ZNF880Q6PDB4 577 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 CPEB3Q8NE35 698 aaKnown RBP10.17□□□□□ -0.78
HDAC6-201ENST00000334136 PLPPR2Q96GM1 343 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 TRBV5-7A0A0A0MS05 114 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 XKRY2A2RUG3 117 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 LRRC30A6NM36 301 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 CHRNA7P36544 502 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 EFNB1P98172 346 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 PSG4Q00888 419 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 RUNX1Q01196 453 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 ZNF90Q03938 601 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 ANKRD55Q3KP44 614 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 IGFL2Q6UWQ7 119 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms