RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 PDCD6O75340 191 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 ARL6IP5O75915 188 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 SNRNP70P08621 437 aaKnown RBP12.87□□□□□ -0.35
HDDC2-201ENST00000318787 CSF1P09603 554 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 VSIG8P0DPA2 414 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 CPEP16870 476 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
HDDC2-201ENST00000318787 TPBGQ13641 420 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 TRAM1Q15629 374 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 NSUN5P1Q3KNT7 163 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 C6orf183Q5T699 404 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 TMEM91Q6ZNR0 172 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 OR10A7Q8NGE5 316 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 MMP27Q9H306 513 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 SERTAD4Q9NUC0 356 aa12.87□□□□□ -0.35
HDDC2-201ENST00000318787 OOSP1A8MZH6 123 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 C12orf77C9JDV5 145 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 LY6LH3BQJ8 138 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 C15orf65H3BRN8 121 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 ORC5O43913 435 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 FBXO24O75426 580 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 SC5DO75845 299 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 LPLP06858 475 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 FAM106CPP0CH98 169 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 RCC1P18754 421 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-201ENST00000318787 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
HDDC2-201ENST00000318787 FABP5Q01469 135 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 HNF4GQ14541 408 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 TBCEQ15813 527 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-201ENST00000318787 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 MOB3BQ86TA1 216 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 OR1L1Q8NH94 360 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 SETD6Q8TBK2 473 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 NICN1Q9BSH3 213 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 Q9H521 79 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 LINC00574Q9H8X3 128 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 LIN7BQ9HAP6 207 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 CHMP1AQ9HD42 196 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-201ENST00000318787 RAB9BQ9NP90 201 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 ISYNA1Q9NPH2 558 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 GFOD1Q9NXC2 390 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 KCNIP1Q9NZI2 227 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 CMYA5Q8N3K9 4069 aa12.86□□□□□ -0.35
HDDC2-201ENST00000318787 IGHV3-72A0A0B4J1Y9 119 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 CCRL2O00421 344 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 HSD17B6O14756 317 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 HBZP02008 142 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 TMEM11P17152 192 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 RAB7AP51149 207 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 C1orf100Q5SVJ3 147 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 C16orf82Q7Z2V1 217 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 OR6M1Q8NGM8 313 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 KCNG3Q8TAE7 436 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 RBM14Q96PK6 669 aaKnown RBP12.85□□□□□ -0.35
HDDC2-201ENST00000318787 FAAP24Q9BTP7 215 aa12.85□□□□□ -0.35
HDDC2-201ENST00000318787 A0A1W2PPI3 338 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 SLC31A2O15432 143 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 OR2F2O95006 317 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 IGKV1D-33P01593 117 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 IGKV1-33P01594 117 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 CD28P10747 220 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 ARSBP15848 533 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 IL3RAP26951 378 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 BLVRBP30043 206 aaPredicted RBP12.84□□□□□ -0.35
HDDC2-201ENST00000318787 CLDN12P56749 244 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 RPS27AP62979 156 aaKnown RBP12.84□□□□□ -0.35
HDDC2-201ENST00000318787 UNC119Q13432 240 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 RAB11BQ15907 218 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 TRAT1Q6PIZ9 186 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 SLC16A12Q6ZSM3 486 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 C5orf24Q7Z6I8 188 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 Q8N2B8 174 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 SULT4A1Q9BR01 284 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 TAF9BQ9HBM6 251 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 ACOT13Q9NPJ3 140 aa12.84□□□□□ -0.35
HDDC2-201ENST00000318787 A0A1W2PRX2 142 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 SLC22A1O15245 554 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 CA11O75493 328 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 BPNT1O95861 308 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.36
HDDC2-201ENST00000318787 CHATP28329 748 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 LOXL3P58215 753 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 HES5Q5TA89 166 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 CENPVQ7Z7K6 275 aaPredicted RBP12.83□□□□□ -0.36
HDDC2-201ENST00000318787 OR8H3Q8N146 312 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 OR52M1Q8NGK5 317 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 MRPL30Q8TCC3 161 aaKnown RBP12.83□□□□□ -0.36
HDDC2-201ENST00000318787 GFI1Q99684 422 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 URM1Q9BTM9 101 aaKnown RBP12.83□□□□□ -0.36
HDDC2-201ENST00000318787 OR2S2Q9NQN1 319 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 PLEKHJ1Q9NW61 149 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 MOB4Q9Y3A3 225 aa12.83□□□□□ -0.36
HDDC2-201ENST00000318787 WNK1Q9H4A3 2382 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 691.5 ms