RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 TMEM210A6NLX4 147 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 PAGE4O60829 102 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 IGF2P01344 180 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 UCP2P55851 309 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 PSG4Q00888 419 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 OR2D3Q8NGH3 330 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 ISOC2Q96AB3 205 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 ZNF714Q96N38 554 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 WDFY2Q96P53 400 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 ZNF426Q9BUY5 554 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 CISD1Q9NZ45 108 aaKnown RBP10.34□□□□□ -0.75
SHPRH-201ENST00000275233 TEX30Q5JUR7 227 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 C19orf35Q6ZS72 473 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 LPAR3Q9UBY5 353 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 P2RY1P47900 373 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 RANP62826 216 aaKnown RBP10.34□□□□□ -0.75
SHPRH-201ENST00000275233 ITLN1Q8WWA0 313 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 PERPQ96FX8 193 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 SHANK3Q9BYB0 1731 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 CCKARP32238 428 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 LRRC75AQ8NAA5 344 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 OR8A1Q8NGG7 326 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 ZNF552Q9H707 407 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-201ENST00000275233 VDAC1P21796 283 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 ROM1Q03395 351 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 HCP5Q6MZN7 132 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
SHPRH-201ENST00000275233 MELTFP08582 738 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 PGLYRP3Q96LB9 341 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 GPA33Q99795 319 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 IGKV3D-11A0A0A0MRZ8 115 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 A1L4Q6 167 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 IGKV3-11P04433 115 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 CDCP2Q5VXM1 449 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 LDLRAD3Q86YD5 345 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 SLC25A45Q8N413 288 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 J3QR89 54 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 SP9P0CG40 484 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 VSIG8P0DPA2 414 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 CXCL3P19876 107 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 EWSR1Q01844 656 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHPRH-201ENST00000275233 IQCJQ1A5X6 159 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 TMEM255AQ5JRV8 349 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 FAM216AQ8WUB2 273 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 ZNF764Q96H86 408 aaPredicted RBP10.33□□□□□ -0.76
SHPRH-201ENST00000275233 SLC25A53Q5H9E4 307 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 CLLU1Q5K131 121 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 OR1L8Q8NGR8 309 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 GSX1Q9H4S2 264 aaPredicted RBP10.33□□□□□ -0.76
SHPRH-201ENST00000275233 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 C5orf52A6NGY3 159 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 CTSBP07858 339 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 OR10G8Q8NGN5 311 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 ANGPTL6Q8NI99 470 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 LEAP2Q969E1 77 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 NEU3Q9UQ49 428 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 PLAUP00749 431 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 ID1P41134 155 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 RPL29P47914 159 aaKnown RBP10.33□□□□□ -0.76
SHPRH-201ENST00000275233 B2MP61769 119 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 ANKRD55Q3KP44 614 aa10.33□□□□□ -0.76
SHPRH-201ENST00000275233 ZMAT5Q9UDW3 170 aaKnown RBP10.33□□□□□ -0.76
SHPRH-201ENST00000275233 CASP8AP2Q9UKL3 1982 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 K7N7A8 449 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 AREGP15514 252 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 PPOXP50336 477 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 UCNP55089 124 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 PLAURQ03405 335 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 TWIST1Q15672 202 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 IGSF11Q5DX21 431 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 OR10C1Q96KK4 312 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 METTL1Q9UBP6 276 aaKnown RBP10.32□□□□□ -0.76
SHPRH-201ENST00000275233 IGSF23A1L1A6 192 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 OR4C45A6NMZ5 311 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 RNF212Q495C1 297 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 KHDC3LQ587J8 217 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 SPANXN1Q5VSR9 72 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 EIF4E3Q8N5X7 224 aaKnown RBP10.32□□□□□ -0.76
SHPRH-201ENST00000275233 KLK13Q9UKR3 277 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 LOC102724200A0A096LPH7 203 aaPredicted RBP10.32□□□□□ -0.76
SHPRH-201ENST00000275233 IGKV1-8A0A0C4DH67 115 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 HOXC8P31273 242 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 SCAND1P57086 179 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 ERVFRD-1P60508 538 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 C10orf35Q96D05 121 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 SNRNP40Q96DI7 357 aaKnown RBP10.32□□□□□ -0.76
SHPRH-201ENST00000275233 CHST5Q9GZS9 411 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 SCN2AQ99250 2005 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 DUXBA0A1W2PPF3 345 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 HELTA6NFD8 242 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 ID4P47928 161 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 RNF133Q8WVZ7 376 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 SEC11CQ9BY50 192 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 HIGD1AQ9Y241 93 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 HIST1H1EP10412 219 aaKnown RBP10.32□□□□□ -0.76
SHPRH-201ENST00000275233 DLK1P80370 383 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 BSXQ3C1V8 233 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 FAM214BQ7L5A3 538 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms