RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 NXPH2O95156 264 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 CD59P13987 128 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 GFRA1P56159 465 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 ZNF429Q86V71 674 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 OR5A2Q8NGI9 324 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 NINJ1Q92982 152 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 TRIB1Q96RU8 372 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 SLC25A31Q9H0C2 315 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 TRAPPC2LQ9UL33 140 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 A0A1W2PPE3 182 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 IFNA1P01562 189 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 BCL3P20749 454 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 LHX2P50458 406 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 SRSF3P84103 164 aaKnown RBP14.05□□□□□ -0.16
CTCF-201ENST00000264010 SPATA46Q5T0L3 261 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 ADGRG7Q96K78 797 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 DMRTA2Q96SC8 542 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 RTBDNQ9BSG5 229 aaPredicted RBP14.05□□□□□ -0.16
CTCF-201ENST00000264010 GPR137BO60478 399 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 ZNF205O95201 554 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 MGST1P10620 155 aaKnown RBP14.05□□□□□ -0.16
CTCF-201ENST00000264010 A6NNC1 897 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 DVL1O14640 695 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 HSD17B6O14756 317 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 ZNF708P17019 499 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 GCH1P30793 250 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 ZNF880Q6PDB4 577 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 TMPRSS7Q7RTY8 843 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 VASH2Q86V25 355 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 OR10J5Q8NHC4 309 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 MRPL24Q96A35 216 aaKnown RBP14.05□□□□□ -0.16
CTCF-201ENST00000264010 C1QTNF5Q9BXJ0 243 aa14.05□□□□□ -0.16
CTCF-201ENST00000264010 WIPF3A6NGB9 483 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 PTGER4P35408 488 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 CEACAM21Q3KPI0 293 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 FBXW9Q5XUX1 488 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 ZNF343Q6P1L6 599 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 VAMP8Q9BV40 100 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 MMP9P14780 707 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 AADACP22760 399 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 NAAAQ02083 359 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 FOXO1Q12778 655 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 MPV17LQ2QL34 196 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 DEFB124Q8NES8 71 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 SARAFQ96BY9 339 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 TMED3Q9Y3Q3 217 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 ATRXP46100 2492 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 IGKV3D-15A0A087WSY6 115 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 NKX2-1P43699 371 aaPredicted RBP14.04□□□□□ -0.16
CTCF-201ENST00000264010 CLDN18P56856 261 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 HIKESHIQ53FT3 197 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 ERASQ7Z444 233 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 FAM58AQ8N1B3 248 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 OR8U1Q8NH10 309 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 FGFBP3Q8TAT2 258 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 OR10C1Q96KK4 312 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 LPAR3Q9UBY5 353 aa14.04□□□□□ -0.16
CTCF-201ENST00000264010 CDRT15L2A8MXV6 281 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 RPL36A-HNRNPH2H7BZ11 118 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 CST4P01036 141 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 SELEP16581 610 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 CA6P23280 308 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 ERVS71-1P61550 626 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 SPNS3Q6ZMD2 512 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 LIAT1Q6ZQX7 453 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 RBMXL1Q96E39 390 aaKnown RBP14.03□□□□□ -0.16
CTCF-201ENST00000264010 SERTAD4Q9NUC0 356 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 OR5AC2Q9NZP5 309 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 RNF222A6NCQ9 220 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 CD82P27701 267 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 SRSF4Q08170 494 aaKnown RBP14.03□□□□□ -0.16
CTCF-201ENST00000264010 TMEM230Q96A57 120 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 IL36GQ9NZH8 169 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 AKAP6Q13023 2319 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 TRAV17A0A0B4J275 112 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A10PA6NDY2 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A18PA6NE21 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A16PA6NEW6 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A20PA6NIJ5 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 CRYM-AS1A6NIL9 109 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A8PA6NJQ4 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A7PA6NKC0 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A22PA8MWA6 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A12PA8MX19 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A5PA8MXJ8 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A23PA8MXZ1 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 HMGB3O15347 200 aaKnown RBP14.03□□□□□ -0.16
CTCF-201ENST00000264010 PPYP01298 95 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A15PP0C7V4 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A13PP0C7W8 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A14PP0C7W9 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 FAM90A24PP0C7X0 464 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 HABP2Q14520 560 aaPredicted RBP14.03□□□□□ -0.16
CTCF-201ENST00000264010 RSPO1Q2MKA7 263 aaPredicted RBP14.03□□□□□ -0.16
CTCF-201ENST00000264010 CPEB3Q8NE35 698 aaKnown RBP14.03□□□□□ -0.16
CTCF-201ENST00000264010 SLC35B3Q9H1N7 401 aa14.03□□□□□ -0.16
CTCF-201ENST00000264010 GRPP07492 148 aa14.02□□□□□ -0.16
CTCF-201ENST00000264010 SELLP14151 372 aa14.02□□□□□ -0.16
CTCF-201ENST00000264010 ELLP55199 621 aaPredicted RBP14.02□□□□□ -0.16
CTCF-201ENST00000264010 LHFPL1Q86WI0 220 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms