RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 RBM11P57052 281 aaKnown RBP11.11□□□□□ -0.63
SNX1-201ENST00000261889 FAM3BP58499 235 aaPredicted RBP11.11□□□□□ -0.63
SNX1-201ENST00000261889 C21orf62-AS1Q17RA5 79 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 AAED1Q7RTV5 226 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 OR5L2Q8NGL0 311 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 CCDC74BQ96LY2 380 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
SNX1-201ENST00000261889 ZNF503-AS2A6NEH8 195 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 HSPA12AO43301 675 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 CHRNA7P36544 502 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 PAX9P55771 341 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 UBE2G2P60604 165 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 COL10A1Q03692 680 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 LTC4SQ16873 150 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 ALKBH2Q6NS38 261 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.11□□□□□ -0.63
SNX1-201ENST00000261889 ZNF808Q8N4W9 903 aaPredicted RBP11.11□□□□□ -0.63
SNX1-201ENST00000261889 SIGLEC12Q96PQ1 595 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 NUDT16L1Q9BRJ7 211 aaKnown RBP11.11□□□□□ -0.63
SNX1-201ENST00000261889 ZNF552Q9H707 407 aaPredicted RBP11.11□□□□□ -0.63
SNX1-201ENST00000261889 SVEP1Q4LDE5 3571 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 TUSC2O75896 110 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 ASPHD1Q5U4P2 390 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 LILRB2Q8N423 598 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 DNASE2BQ8WZ79 361 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 GPR146Q96CH1 333 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 PCGF1Q9BSM1 259 aa11.11□□□□□ -0.63
SNX1-201ENST00000261889 LYRM2Q9NU23 88 aaPredicted RBP11.11□□□□□ -0.63
SNX1-201ENST00000261889 A0A0U1RQV5 110 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 EREGO14944 169 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 BCAT2O15382 392 aaPredicted RBP11.1□□□□□ -0.63
SNX1-201ENST00000261889 SYNGR3O43761 229 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 RHBDL1O75783 438 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 OTX2P32243 289 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 EXT1Q16394 746 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 LPAL2Q16609 132 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 FAM90A2PQ658T7 463 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 CXorf67Q86X51 503 aaPredicted RBP11.1□□□□□ -0.63
SNX1-201ENST00000261889 SERPINE2P07093 398 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 GZMHP20718 246 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 WNT5AP41221 380 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 CXCL12P48061 93 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 OR51G1Q8NGK1 321 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 HES7Q9BYE0 225 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 WNT5BQ9H1J7 359 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 KIAA1456Q9P272 454 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 TMED3Q9Y3Q3 217 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 ZNF732B4DXR9 585 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 CELA3AP09093 270 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
SNX1-201ENST00000261889 LMO1P25800 156 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 GLIPR1P48060 266 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
SNX1-201ENST00000261889 GNB2P62879 340 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 C17orf82Q86X59 251 aaPredicted RBP11.1□□□□□ -0.63
SNX1-201ENST00000261889 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 OR4X1Q8NH49 305 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 PLPPR1Q8TBJ4 325 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 SDSLQ96GA7 329 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 FOXB1Q99853 325 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 PRRG4Q9BZD6 226 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 SLC25A31Q9H0C2 315 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 MSL2Q9HCI7 577 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 MTCH1Q9NZJ7 389 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 FUT9Q9Y231 359 aa11.1□□□□□ -0.63
SNX1-201ENST00000261889 IGHV5-10-1A0A0J9YXX1 117 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 SIRPB1O00241 398 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 RBMXL2O75526 392 aaKnown RBP11.09□□□□□ -0.63
SNX1-201ENST00000261889 IGKV1D-33P01593 117 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 IGKV1-33P01594 117 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 CNN3Q15417 329 aaKnown RBP11.09□□□□□ -0.63
SNX1-201ENST00000261889 ZNF66Q6ZN08 573 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 C16orf82Q7Z2V1 217 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 CCDC71LQ8N9Z2 235 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 SMIM7Q9BQ49 75 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 PROK2Q9HC23 129 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 CBLN4Q9NTU7 201 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 PKDREJQ9NTG1 2253 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 RRP8O43159 456 aaKnown RBP11.09□□□□□ -0.63
SNX1-201ENST00000261889 OR4A8P0C604 315 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 PAX6P26367 422 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 NUBP1P53384 320 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 CARD18P57730 90 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 ARL6IP1Q15041 203 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 GCSAMLQ5JQS6 135 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 TPRX1Q8N7U7 411 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 OR10V1Q8NGI7 309 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 IFI44Q8TCB0 444 aa11.09□□□□□ -0.63
SNX1-201ENST00000261889 RCC1LQ96I51 464 aaKnown RBP11.09□□□□□ -0.63
SNX1-201ENST00000261889 COL27A1Q8IZC6 1860 aaPredicted RBP11.08□□□□□ -0.63
SNX1-201ENST00000261889 NCKAP5O14513 1909 aa11.08□□□□□ -0.63
SNX1-201ENST00000261889 LRRC3CA6NJW4 275 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 PATE3B3GLJ2 98 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 PITX3O75364 302 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 CRYGSP22914 178 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 H3F3AP84243 136 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 OR8G1Q15617 311 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 BATFQ16520 125 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms