RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 NEURL1O76050 574 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 SYNGR4O95473 234 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 TK1P04183 234 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 CD82P27701 267 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 RRADP55042 308 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 HERV-K104P61576 105 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 TNFRSF9Q07011 255 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 RSPO1Q2MKA7 263 aaPredicted RBP9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 C4orf17Q53FE4 359 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 ASCL4Q6XD76 172 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 MBD3L1Q8WWY6 194 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 TP53RKQ96S44 253 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 ATP5SQ99766 215 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 GPR35Q9HC97 309 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 GLRX2Q9NS18 164 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 PIGLQ9Y2B2 252 aa9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 KLF13Q9Y2Y9 288 aaPredicted RBP9.27□□□□□ -0.93
CHRNA1-201ENST00000261007 PRUNE2Q8WUY3 3088 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 BCL2P10415 239 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 FAHP16930 419 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 OPRM1P35372 400 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 CLDN15P56746 228 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 RAB11AP62491 216 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 ID3Q02535 119 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 PMS2P11Q13670 270 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 OR1C1Q15619 314 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 ODF3L1Q8IXM7 274 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 IL22RA1Q8N6P7 574 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 OR14J1Q9UGF5 321 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 RNF150Q9ULK6 438 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 MRPL33O75394 65 aaKnown RBP9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 SNRPCP09234 159 aaKnown RBP9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF32P17041 273 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 CCKARP32238 428 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 CEACAM16Q2WEN9 425 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 TMEM211Q6ICI0 200 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 SPINK14Q6IE38 97 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 LHFPL2Q6ZUX7 228 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 CENPVQ7Z7K6 275 aaPredicted RBP9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF695Q8IW36 515 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 SELENOHQ8IZQ5 122 aaKnown RBP9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 OR11L1Q8NGX0 322 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 PIGTQ969N2 578 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 POM121Q96HA1 1249 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 AGMATQ9BSE5 352 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 OR2H1Q9GZK4 316 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 SDK2Q58EX2 2172 aa9.26□□□□□ -0.93
CHRNA1-201ENST00000261007 PINLYPA6NC86 204 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 KLRC4-KLRK1H3BQV0 150 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 SSSCA1O60232 199 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 IL18BPO95998 194 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 CRYABP02511 175 aaKnown RBP9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 PFN1P07737 140 aaKnown RBP9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 AADACP22760 399 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 OMGP23515 440 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 NPBWR2P48146 333 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 LHX2P50458 406 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 COL10A1Q03692 680 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 HES3Q5TGS1 186 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 MEX3BQ6ZN04 569 aaKnown RBP9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 MRPL52Q86TS9 123 aaKnown RBP9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 CA5BP1Q8WTZ4 195 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 R3HDM4Q96D70 268 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 ALKBH3Q96Q83 286 aaPredicted RBP9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 HIST1H2AAQ96QV6 131 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 GNG13Q9P2W3 67 aa9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 UBE2J1Q9Y385 318 aaPredicted RBP9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 NCOA6Q14686 2063 aaPredicted RBP9.25□□□□□ -0.93
CHRNA1-201ENST00000261007 PIGBOS1A0A0B4J2F0 54 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 C5orf63A6NC05 138 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 TNFSF15O95150 251 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 IFNA5P01569 189 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 LCATP04180 440 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 COX5BP10606 129 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 B4GALT1P15291 398 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 EPHA1P21709 976 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 PLGLB1Q02325 96 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 RNPS1Q15287 305 aaKnown RBP9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF774Q6NX45 483 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 P4HA3Q7Z4N8 544 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 IL22RA2Q969J5 263 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 TTTY12Q9BZ98 90 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 PRDM14Q9GZV8 571 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 IL36GQ9NZH8 169 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 NAT8Q9UHE5 227 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 PCSK5Q92824 1860 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 A0A1W2PNU3 283 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 XKRY2A2RUG3 117 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 PPP5D1E7EU14 171 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 M0R143 59 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 PPYP01298 95 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 IFNA1P01562 189 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 GLI4P10075 376 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 VDAC1P21796 283 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 UCP1P25874 307 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 CLDN18P56856 261 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 PSG4Q00888 419 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms