RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ARL6IP5O75915 188 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 IGHV3-43DP0DP04 118 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 RCC1P18754 421 aaPredicted RBP18.37■□□□□ 0.53
LSM4-201ENST00000252816 CALRP27797 417 aaKnown RBP18.37■□□□□ 0.53
LSM4-201ENST00000252816 CHATP28329 748 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 ARHGDIBP52566 201 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 MADCAM1Q13477 382 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 P2RY14Q15391 338 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 NKAPLQ5M9Q1 402 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 HIST2H2BDQ6DRA6 164 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 KCNG3Q8TAE7 436 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 TOMM40LQ969M1 308 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 NICN1Q9BSH3 213 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 PRSS22Q9GZN4 317 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 A0A1W2PPI3 338 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 SLC17A2O00624 439 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 CA11O75493 328 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 BPNT1O95861 308 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 VSIG10L2P0DP72 767 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 MNDAP41218 407 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 HERPUD1Q15011 391 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 DTX3Q8N9I9 347 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 OR10X1Q8NGY0 326 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 OR1L1Q8NH94 360 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 MRPL30Q8TCC3 161 aaKnown RBP18.36■□□□□ 0.53
LSM4-201ENST00000252816 SULT4A1Q9BR01 284 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 TM2D1Q9BX74 207 aa18.36■□□□□ 0.53
LSM4-201ENST00000252816 A0A0A6YYD4 124 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 H3BUI4 141 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 M0QZ24 198 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 C6orf183Q5T699 404 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 C5orf24Q7Z6I8 188 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 C11orf44Q8N8P7 122 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 OR56B4Q8NH76 319 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 SLC25A33Q9BSK2 321 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 Q9H521 79 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 LIN7BQ9HAP6 207 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 PLGRKTQ9HBL7 147 aa18.35■□□□□ 0.53
LSM4-201ENST00000252816 MBNL3Q9NUK0 354 aaKnown RBP18.35■□□□□ 0.53
LSM4-201ENST00000252816 FAM90A9PA6NNJ1 464 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 SPINT2O43291 252 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 MRPS14O60783 128 aaKnown RBP18.34■□□□□ 0.53
LSM4-201ENST00000252816 HBZP02008 142 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 TMEM95Q3KNT9 176 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 C16orf82Q7Z2V1 217 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 C6orf201Q7Z4U5 140 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 SPARTQ8N0X7 666 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 PRR18Q8N4B5 295 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 LINC00311Q8N616 119 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 DRAM1Q8N682 238 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 CAPSLQ8WWF8 208 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 CFHR4Q92496 578 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 RBM14Q96PK6 669 aaKnown RBP18.34■□□□□ 0.53
LSM4-201ENST00000252816 NEDD4LQ96PU5 975 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 FAAP24Q9BTP7 215 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 NDUFB11Q9NX14 153 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 MEGF8Q7Z7M0 2845 aa18.34■□□□□ 0.53
LSM4-201ENST00000252816 SLC31A2O15432 143 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 OR2F2O95006 317 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 AMY1AP04745 511 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 AMY2AP04746 511 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 CLDN12P56749 244 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 RAB11BQ15907 218 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 Q6ZTK2 550 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 C8orf31Q8N9H6 132 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 ZNF439Q8NDP4 499 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 OR10V1Q8NGI7 309 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 LPAR5Q9H1C0 372 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 TAF9BQ9HBM6 251 aa18.33■□□□□ 0.52
LSM4-201ENST00000252816 SHISA3A0PJX4 238 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 TSPAN15O95858 294 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 SNRNP70P08621 437 aaKnown RBP18.32■□□□□ 0.52
LSM4-201ENST00000252816 ARSBP15848 533 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 RAB7AP51149 207 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 UBE2UQ5VVX9 321 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 TRAT1Q6PIZ9 186 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 CD200R1LQ6Q8B3 271 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 OR2W3Q7Z3T1 314 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 THNSL2Q86YJ6 484 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 OR8H3Q8N146 312 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 SVOPQ8N4V2 548 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 OR51D1Q8NGF3 324 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 WIPF2Q8TF74 440 aaPredicted RBP18.32■□□□□ 0.52
LSM4-201ENST00000252816 AKR1E2Q96JD6 320 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 OCSTAMPQ9BR26 566 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 WNT10AQ9GZT5 417 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 GNG12Q9UBI6 72 aa18.32■□□□□ 0.52
LSM4-201ENST00000252816 RRP15Q9Y3B9 282 aaKnown RBP18.32■□□□□ 0.52
LSM4-201ENST00000252816 HSD17B6O14756 317 aa18.31■□□□□ 0.52
LSM4-201ENST00000252816 FAM106CPP0CH98 169 aa18.31■□□□□ 0.52
LSM4-201ENST00000252816 BLVRBP30043 206 aaPredicted RBP18.31■□□□□ 0.52
LSM4-201ENST00000252816 REG1BP48304 166 aa18.31■□□□□ 0.52
LSM4-201ENST00000252816 ZNF134P52741 427 aa18.31■□□□□ 0.52
LSM4-201ENST00000252816 ZNF816Q0VGE8 651 aaPredicted RBP18.31■□□□□ 0.52
LSM4-201ENST00000252816 Q3ZCU0 254 aa18.31■□□□□ 0.52
LSM4-201ENST00000252816 Q6ZPA2 131 aa18.31■□□□□ 0.52
LSM4-201ENST00000252816 ST6GALNAC6Q969X2 333 aa18.31■□□□□ 0.52
LSM4-201ENST00000252816 YTHDF1Q9BYJ9 559 aaKnown RBP18.31■□□□□ 0.52
LSM4-201ENST00000252816 RAB9BQ9NP90 201 aa18.31■□□□□ 0.52
LSM4-201ENST00000252816 V9GY05 133 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms