RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SRPXP78539 464 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 SRSF6Q13247 344 aaKnown RBP12.43□□□□□ -0.42
CNOT3-201ENST00000221232 HABP2Q14520 560 aaPredicted RBP12.43□□□□□ -0.42
CNOT3-201ENST00000221232 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 HES3Q5TGS1 186 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 DBX2Q6ZNG2 339 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 LYRM2Q9NU23 88 aaPredicted RBP12.43□□□□□ -0.42
CNOT3-201ENST00000221232 FZR1Q9UM11 496 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 OR2W1Q9Y3N9 320 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 A0A1W2PPE3 182 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 H0YL77 283 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 KLRC4-KLRK1H3BQV0 150 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 SP9P0CG40 484 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 F2RP25116 425 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 THNSL2Q86YJ6 484 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 OR1K1Q8NGR3 316 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 SLC35B3Q9H1N7 401 aa12.43□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF98A6NK75 572 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 UCP1P25874 307 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 TLE1Q04724 770 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF266Q14584 549 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF324BQ6AW86 544 aaPredicted RBP12.42□□□□□ -0.42
CNOT3-201ENST00000221232 WDR86Q86TI4 376 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 SLC25A31Q9H0C2 315 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 C11orf1Q9H5F2 150 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 GTF3C1Q12789 2109 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 TRGV5A0A0B4J1U4 118 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A10PA6NDY2 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A18PA6NE21 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A16PA6NEW6 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A20PA6NIJ5 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A8PA6NJQ4 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A7PA6NKC0 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A22PA8MWA6 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A12PA8MX19 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A5PA8MXJ8 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A23PA8MXZ1 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 AGFG2O95081 481 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A15PP0C7V4 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A13PP0C7W8 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A14PP0C7W9 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FAM90A24PP0C7X0 464 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 PAX9P55771 341 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 ID3Q02535 119 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 RNPS1Q15287 305 aaKnown RBP12.42□□□□□ -0.42
CNOT3-201ENST00000221232 SOHLH1Q5JUK2 328 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 FBXW9Q5XUX1 488 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 LURAP1LQ8IV03 231 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 SAXO1Q8IYX7 474 aa12.42□□□□□ -0.42
CNOT3-201ENST00000221232 STRAPQ9Y3F4 350 aaKnown RBP12.42□□□□□ -0.42
CNOT3-201ENST00000221232 OR2H2O95918 312 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 HEXAP06865 529 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 RPS16P62249 146 aaKnown RBP12.41□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF826PQ6ZT77 177 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 SCCPDHQ8NBX0 429 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 BCL2L2Q92843 193 aaPredicted RBP12.41□□□□□ -0.42
CNOT3-201ENST00000221232 RSG1Q9BU20 258 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 PBDC1Q9BVG4 233 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 OR51I2Q9H344 312 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 CACNG5Q9UF02 275 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 KLF13Q9Y2Y9 288 aaPredicted RBP12.41□□□□□ -0.42
CNOT3-201ENST00000221232 NXPH2O95156 264 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 METTL15P1P0C7V9 234 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 COX5BP10606 129 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 PMELP40967 661 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 RND3P61587 244 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 WDYHV1Q96HA8 205 aa12.41□□□□□ -0.42
CNOT3-201ENST00000221232 C1orf196B1AJZ1 125 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 C21orf140B9A014 251 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 PITX3O75364 302 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 S100A6P06703 90 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 CD46P15529 392 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 CEACAM6P40199 344 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 SULT1A1P50225 295 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 HLA-DRB3P79483 266 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 CNEP1R1Q8N9A8 125 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 OR10V1Q8NGI7 309 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 URGCP-MRPS24S4R325 110 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 PCNX2A6NKB5 2137 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 RBFOX3A6NFN3 312 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 WNT9BO14905 357 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 SS18L1O75177 396 aaPredicted RBP12.4□□□□□ -0.42
CNOT3-201ENST00000221232 CTXN2P0C2S0 81 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF14P17017 642 aaPredicted RBP12.4□□□□□ -0.42
CNOT3-201ENST00000221232 RAB5CP51148 216 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 CCL11P51671 97 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 RAB5BP61020 215 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 ZNF766Q5HY98 468 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 AKR1C8PQ5T2L2 129 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 SPSB3Q6PJ21 355 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 RBMS3Q6XE24 437 aaKnown RBP12.4□□□□□ -0.42
CNOT3-201ENST00000221232 TINAGQ9UJW2 476 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 MPC1Q9Y5U8 109 aa12.4□□□□□ -0.42
CNOT3-201ENST00000221232 MAP1BP46821 2468 aaKnown RBP12.4□□□□□ -0.42
CNOT3-201ENST00000221232 TRAV20A0A0B4J274 112 aa12.4□□□□□ -0.43
CNOT3-201ENST00000221232 H0Y980 276 aa12.4□□□□□ -0.43
CNOT3-201ENST00000221232 IGKV1-39P01597 117 aa12.4□□□□□ -0.43
CNOT3-201ENST00000221232 IGKV1D-39P04432 117 aa12.4□□□□□ -0.43
CNOT3-201ENST00000221232 PTAFRP25105 342 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms