RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DEFB108AA8MXU0 73 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 RLN2P04090 185 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 APOBEC3AP31941 199 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ZNF345Q14585 488 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TOMM40LQ969M1 308 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 RNF7Q9UBF6 113 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PPP1R3CQ9UQK1 317 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TRAV39A0A0B4J263 110 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 BET1O15155 118 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PGAM2P15259 253 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PRDX2P32119 198 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 OR3A1P47881 315 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 HLA-DRB3P79483 266 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SLC9A3R2Q15599 337 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 FAM201AQ5SY85 155 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 MOB1BQ7L9L4 216 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TGIF2LYQ8IUE0 185 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 LILRB1Q8NHL6 650 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ITLN2Q8WWU7 325 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 MOB3AQ96BX8 217 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CNTNAP3BQ96NU0 1288 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CNTNAP3Q9BZ76 1288 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SHARPINQ9H0F6 387 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 MBNL3Q9NUK0 354 aaKnown RBP16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CISD1Q9NZ45 108 aaKnown RBP16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PRELID1Q9Y255 219 aa16.49■□□□□ 0.23
TNFRSF1A-201ENST00000162749 DOPEY1Q5JWR5 2465 aa16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 IGHV3OR15-7A0A075B7D8 119 aa16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 OR2F2O95006 317 aa16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TK1P04183 234 aa16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 RPS2P15880 293 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TNFRSF1AP19438 455 aa16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 LOXP28300 417 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 FXYD4P59646 89 aa16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 OR2F1Q13607 317 aa16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ZNF808Q8N4W9 903 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 VRK1Q99986 396 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TRAPPC2LQ9UL33 140 aa16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 C14orf166Q9Y224 244 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-201ENST00000162749 C13orf42A0A1B0GVH6 325 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 C5orf51A6NDU8 294 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ZNF737O75373 536 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CLDN14O95500 239 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CYB5R3P00387 301 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PPYP01298 95 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 AADACP22760 399 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 AESQ08117 197 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TESK1Q15569 626 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 EFNB3Q15768 340 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 MST1LQ2TV78 715 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ANKRD55Q3KP44 614 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 OR4A4PQ8NGN8 299 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 RBPMSQ93062 196 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 COQ2Q96H96 371 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CTSDP07339 412 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CTXN2P0C2S0 81 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 KCNJ3P48549 501 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 IQCF2Q8IXL9 164 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ST8SIA2Q92186 375 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 KIRREL1Q96J84 757 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 MED9Q9NWA0 146 aa16.47■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TMEM30CPA0ZSE6 113 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 MFSD2BA6NFX1 497 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ADAP1O75689 374 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ZNF728P0DKX0 622 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CD80P33681 288 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SLC35E4Q6ICL7 350 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ACOT7LQ6ZUV0 252 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 FAM222BQ8WU58 562 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PIK3IP1Q96FE7 263 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TMEM204Q9BSN7 226 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SAP30LQ9HAJ7 183 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SEBOXQ9HB31 216 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SDHAF2Q9NX18 166 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 DCAF16Q9NXF7 216 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 MBD2Q9UBB5 411 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PCDHB10Q9UN67 800 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 A0A0B4J2A0 478 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 MPTX1A8MV57 137 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 B9A039 149 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 KCNAB3O43448 404 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 M6PRP20645 277 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 AGAP20933 346 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 THAP6Q8TBB0 222 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CABLES2Q9BTV7 478 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 NMES1Q9C002 83 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SHPKQ9UHJ6 478 aa16.46■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TRBV6-7A0A0A0MS04 114 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 BCL2L11O43521 198 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PSMB6P28072 239 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 GABRA2P47869 451 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 HERV-K104P61576 105 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 UBA52P62987 128 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PAX5Q02548 391 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 OR11L1Q8NGX0 322 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 OR1S1Q8NH92 325 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 RNF126Q9BV68 326 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 MS4A5Q9H3V2 200 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DYNLRB1Q9NP97 96 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 TUSC2O75896 110 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms