RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Klf5Q9Z0Z7 446 aaKnown RBP13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Gm14288E9Q9W0 88 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Vmn1r67G5E8C1 305 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 OtpO09113 325 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Slc25a4P48962 298 aaKnown RBP13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Thbs3Q05895 956 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Mogat2Q80W94 334 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Lhfpl2Q8BGA2 222 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Stbd1Q8C7E7 338 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Olfr794Q8VF26 320 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Rpp25Q91WE3 199 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Mansc1Q9CR33 414 aa13.9□□□□□ -0.18
Pcdha9-201ENSMUST00000115659 Gm17657E9PWY5 170 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Arrdc5Q497K5 325 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Plk3Q60806 631 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Adam12Q61824 903 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Zfp933Q6PEE4 468 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 LssQ8BLN5 733 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Xkr8Q8C0T0 401 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Stpg2Q8C8J0 561 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Ntng2Q8R4F1 589 aaKnown RBP13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Gm15013V9GWY0 266 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Mast2Q60592 1734 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Ankrd60A2AMD2 318 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Degs1O09005 323 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 P10404 641 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 KrasP32883 189 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Gcnt2P97402 401 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 PjvkQ0ZLH2 352 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Vma21Q78T54 101 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Wdr77Q99J09 342 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 SdhbQ9CQA3 282 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Slc50a1Q9CXK4 221 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Nudt22Q9DD16 308 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Btaf1E9QAE3 1848 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 MpgQ04841 333 aaKnown RBP13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 A4gntQ14BT6 341 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Lcn12Q6JVL5 193 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Gm13757Q7TR17 305 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Atxn7l2Q8C8K6 696 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Fkbp11Q9D1M7 201 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 HcstQ9QUJ0 79 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Rab9aQ9R0M6 201 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 CnmdQ9Z1F6 334 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Gm14444A2ARW3 426 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Guca2aP33680 116 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 DhhQ61488 396 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Znf629Q6A085 867 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr645Q7TRQ1 315 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr504Q7TRU7 318 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Atg4dQ8BGV9 474 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Edem2Q8BJT9 577 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr112Q8C0S2 320 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Cadm4Q8R464 388 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr137Q8VFC2 312 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr497Q8VG08 314 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Derl3Q9D8K3 228 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Erv3Q9DAX3 200 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 PaplnQ9EPX2 1280 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 SrfQ9JM73 504 aa13.89□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Gpr27O54897 379 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Rnf24Q8BGI1 148 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 C130073F10RikQ8C4L8 201 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Tmem128Q9CZB9 163 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Stard10Q9JMD3 291 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Adamtsl1Q8BLI0 1745 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Tnrc6cQ3UHC0 1690 aaKnown RBP13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Sh2d1bO35324 132 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 CapgP24452 352 aaKnown RBP13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Cib3Q0P523 160 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Nkpd1Q0VF94 599 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Fam196aQ3USH1 422 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr994Q8VF73 314 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr108Q8VFA1 320 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Wwtr1Q9EPK5 395 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Vmn1r56Q9EPS9 310 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Tmem215A7E1Z1 235 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Hist1h1dP43277 221 aaKnown RBP13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr10Q60883 311 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 CdiptQ8VDP6 213 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr638Q8VH20 321 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr1438-ps1A0A140LHS9 319 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr251E9Q891 316 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Slc6a1P31648 599 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Sumo1P63166 101 aaKnown RBP13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 SpartQ8R1X6 671 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 9230110F15RikQ9D262 117 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr1248A0A1L1SSZ5 307 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Gm5916G5E8W5 102 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Ppp1cbP62141 327 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Rhox4gQ2MDF7 205 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Rhox4dQ2MDG0 205 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Rhox4eQ504P9 205 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Slc35e1Q8CD26 409 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Olfr828Q8VFM8 312 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Rfpl4aQ8VH31 287 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Scgb1b27Q91WB5 92 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Necap1Q9CR95 275 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 MeiobQ9D513 470 aa13.88□□□□□ -0.19
Pcdha9-201ENSMUST00000115659 Naa60Q9DBU2 242 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms