RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Snrnp70Q62376 448 aaKnown RBP13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Asphd2Q80VP9 343 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Clvs2Q8BG92 327 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Trib3Q8K4K2 354 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr1100Q8VFM1 321 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Med30Q9CQI9 178 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Ndufa9Q9DC69 377 aaKnown RBP13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Dock9Q8BIK4 2055 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Ighv5-15A0A0A6YWC7 117 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Trbv15A0A0A6YYE3 115 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Ino80eA0A0U1RP99 260 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Dgat2l6A2ADU8 337 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Ankrd65F6YK91 380 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Vmn1r34G3XA52 309 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Sp100O35892 482 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Tbx15O70306 602 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Itga5P11688 1053 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Hspb1P14602 209 aaKnown RBP13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 PkiaP63248 76 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Tex30Q3TUU5 225 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Tmem231Q3U284 315 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 6430531B16RikQ3V2J1 307 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Trav5d-4Q5R1F6 114 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr782Q7TRI2 314 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Cst14Q8VII3 130 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 OcstampQ9D611 498 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Prss8Q9ESD1 342 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Naa10Q9QY36 235 aa13.51□□□□□ -0.25
Vcan-201ENSMUST00000109543 Plxnb1Q8CJH3 2119 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Ighv1-76A0A0G2JFE9 117 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr548-ps1A0A1B0GSG0 314 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 4930435E12RikA6X8Z9 381 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Gm5458L7N219 204 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 DaoP18894 345 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Cd40lgP27548 260 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 St6galnac2P70277 373 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 MplQ08351 625 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Lefty1Q64280 368 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Sat2Q6P8J2 170 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Dcun1d4Q8CCA0 292 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Alg12Q8VDB2 486 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Mrpl21Q9D1N9 209 aaKnown RBP13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Fam219aQ9D772 157 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 IcaQ9DBD0 700 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Lhx2Q9Z0S2 406 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 S1pr3Q9Z0U9 378 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Dcaf10A2AKB9 566 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr1348F6VB59 318 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Scd2P13011 358 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Arpc4P59999 168 aaKnown RBP13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Bcl2l2P70345 193 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 SlbpP97440 275 aaKnown RBP13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Vmn1r236Q05A06 334 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Bbs12Q5SUD9 708 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr46Q8VGJ4 318 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Rtn4rQ99PI8 473 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Arrdc2Q9D668 407 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Suv39h2Q9EQQ0 477 aa13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 TsnaxQ9QZE7 290 aaKnown RBP13.5□□□□□ -0.25
Vcan-201ENSMUST00000109543 Trav15d-1-dv6d-1A0A075B624 124 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Prrt2E9PUL5 346 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Cxcl2P10889 100 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 GrprP21729 384 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Cd7P50283 210 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Arf1P84078 181 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Zglp1Q1WG82 266 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Fam117aQ7TNF9 451 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr524Q7TRU0 318 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Zpld1Q8BGZ8 415 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Plcxd3Q8BLJ3 321 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Tmem51Q99LG1 249 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Slc24a3Q99PD7 645 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Pga5Q9D106 387 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Nqo2Q9JI75 231 aa13.49□□□□□ -0.25
Vcan-201ENSMUST00000109543 Gm42543A0A0G2JET4 117 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Ly6g6fB2RXM6 300 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr914E9PW59 316 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 2010315B03RikJ3QK55 433 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Lyz2P08905 148 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Cd1d1P11609 336 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Cd1d2P11610 336 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Defa-rs2P17534 91 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Rab18P35293 206 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 CycsP62897 105 aaKnown RBP13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Vmn1r223Q5SSA0 361 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Bloc1s3Q5U5M8 195 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr1357Q7TQU7 313 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Pif1Q80SX8 650 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 C730034F03RikQ8BGL5 111 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 PigmQ8C2R7 423 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Vmn1r235Q8R297 328 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Ca15Q99N23 324 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Q9DAE8 263 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Lhx6Q9R1R0 363 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Ndufa7Q9Z1P6 113 aaKnown RBP13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Tanc2A2A690 1994 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Olfr685A0A1L1SVG7 331 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Gm6880A3KG45 208 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 IfnabL7MTU6 190 aa13.48□□□□□ -0.25
Vcan-201ENSMUST00000109543 Slc18a3O35304 530 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms