RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Clec12bQ149M0 275 aa13.21□□□□□ -0.29
Pcdh20-201ENSMUST00000061628 SelplgQ62170 397 aa13.21□□□□□ -0.29
Pcdh20-201ENSMUST00000061628 Tmem186Q9CR76 216 aa13.21□□□□□ -0.29
Pcdh20-201ENSMUST00000061628 Cacna1dQ99246 2179 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1158A2BHP7 313 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Tnfrsf17O88472 185 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Il5P04401 133 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gdf1P20863 357 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 ArntP53762 791 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Pebp1P70296 187 aaKnown RBP13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Dlx4P70436 240 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Slc24a5Q8C261 501 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Rae1Q8C570 368 aaKnown RBP13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Trib1Q8K4K4 372 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1226Q8VGM5 310 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Malsu1Q9CWV0 228 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Nrg4Q9WTX4 115 aa13.21□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 HrasQ61411 189 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Galnt6Q8C7U7 622 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 ApehQ8R146 732 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Odf4Q8VI88 290 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Rpl11Q9CXW4 178 aaKnown RBP13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 1700025F22RikQ9D9Y7 111 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Slc22a5Q9Z0E8 557 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1406E9Q8X1 310 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Vmn1r121K7N6J4 314 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 SdcbpO08992 299 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ifna6P07350 189 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gnb1P62874 340 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Adam12Q61824 903 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ldlrad4Q8BWJ4 306 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1495Q8VEZ4 319 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Scn11aQ9R053 1765 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Rnf212bD3Z423 297 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ccl22O88430 92 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Klk1b1P00755 261 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 FahP35505 419 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Slc7a15Q50E62 488 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Znf488Q5HZG9 337 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr141Q60880 325 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Slc16a12Q8BGC3 486 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 C130073F10RikQ8C4L8 201 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ntng2Q8R4F1 589 aaKnown RBP13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Shisa5Q9D7I0 235 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Klf5Q9Z0Z7 446 aaKnown RBP13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ankrd31A0A140LI88 1765 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm13723A0A1L1SUP2 315 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm14444A2ARW3 426 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Rhox7bA6PW38 321 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Zbtb25G3UW50 439 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Sult2a1P52843 285 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 AmbpQ07456 349 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1340Q3KPC7 315 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Slc35e3Q6PGC7 313 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Lrrtm1Q8K377 522 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 ClpsQ9CQC2 113 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Sdf2Q9DCT5 211 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 ReckQ9Z0J1 971 aa13.2□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm36864A0A1Y7VJE6 447 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Igsf21Q7TNR6 468 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Edem2Q8BJT9 577 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 SinhcafQ8C8M1 221 aaKnown RBP13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Clec14aQ8VCP9 459 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr536Q8VFE9 307 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm4779A0A1B0GR91 561 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Tarm1B6A8R8 288 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Zfp97E9PZP6 546 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Zfp960L7N267 546 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Tgif1P70284 272 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Tmem217Q14AF1 189 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Slc25a26Q5U680 274 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr1286Q7TQY2 305 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Tmem106cQ80VP8 260 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Xkr8Q8C0T0 401 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Trpm6Q8CIR4 2028 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr497Q8VG08 314 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Mansc1Q9CR33 414 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Necap1Q9CR95 275 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Fxyd4Q9D2W0 88 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Nova1Q9JKN6 507 aaKnown RBP13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Stard10Q9JMD3 291 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Nup188Q6ZQH8 1759 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gcnt2P97402 401 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Snai2P97469 269 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 B3gnt9Q8VI16 399 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ms4a6bQ99N09 244 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gins3Q9CY94 216 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Mnx1Q9QZW9 404 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Scml2B1AVB3 969 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Dnase1P49183 284 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Rab7aP51150 207 aaKnown RBP13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Ppp1cbP62141 327 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Olfr963Q7TRA9 311 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Nanos1Q80WY3 267 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Nsun3Q8CCT7 348 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Lysmd1Q9D0E3 226 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Q9D7E4 109 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 PrknQ9WVS6 464 aa13.19□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Rbm24D3Z4I3 236 aaKnown RBP13.18□□□□□ -0.3
Pcdh20-201ENSMUST00000061628 Gm9964E9Q9S5 144 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms