RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 HMGN3Q15651 99 aa14.68□□□□□ -0.06
PHGDH-232ENST00000641947 TMEM185AQ8NFB2 350 aa14.68□□□□□ -0.06
PHGDH-232ENST00000641947 OR4A4PQ8NGN8 299 aa14.68□□□□□ -0.06
PHGDH-232ENST00000641947 TOMM40LQ969M1 308 aa14.68□□□□□ -0.06
PHGDH-232ENST00000641947 WDR89Q96FK6 387 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-232ENST00000641947 GAFA1Q96PS6 74 aa14.68□□□□□ -0.06
PHGDH-232ENST00000641947 DCTN5Q9BTE1 182 aa14.68□□□□□ -0.06
PHGDH-232ENST00000641947 CHD6Q8TD26 2715 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 C9orf170A2RU37 121 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 OOEPA6NGQ2 149 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 TMEM178BH3BS89 294 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 H7C1Q1 480 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 TUSC2O75896 110 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 PPYP01298 95 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 GYPAP02724 150 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 PGAM2P15259 253 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 RPS2P15880 293 aaKnown RBP14.67□□□□□ -0.06
PHGDH-232ENST00000641947 EIF2B2P49770 351 aaKnown RBP14.67□□□□□ -0.06
PHGDH-232ENST00000641947 SNRPD2P62316 118 aaKnown RBP14.67□□□□□ -0.06
PHGDH-232ENST00000641947 SURF2Q15527 256 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-232ENST00000641947 KRBOX4Q5JUW0 171 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 C11orf71Q6IPW1 123 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 LYG2Q86SG7 212 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 TCTE3Q8IZS6 198 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 OR1A1Q9P1Q5 309 aa14.67□□□□□ -0.06
PHGDH-232ENST00000641947 SPTAN1Q13813 2472 aaKnown RBP14.66□□□□□ -0.06
PHGDH-232ENST00000641947 MEIKINA0A087WXM9 373 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 TRBV6-7A0A0A0MS04 114 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 IGKV1D-13A0A0B4J2D9 117 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 K7N7A8 449 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 SOD3P08294 240 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 IGKV1-13P0DP09 117 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 IRF2P14316 349 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 GLP1RP43220 463 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 KCNJ3P48549 501 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 PAX5Q02548 391 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 EDDM3AQ14507 147 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 FAM53AQ6NSI3 398 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-232ENST00000641947 FGFRL1Q8N441 504 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 PRR18Q8N4B5 295 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 OR13A1Q8NGR1 328 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 SDSLQ96GA7 329 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 SNX22Q96L94 193 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 TAF9BQ9HBM6 251 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 TMEM106BQ9NUM4 274 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 MGAT4CQ9UBM8 478 aa14.66□□□□□ -0.06
PHGDH-232ENST00000641947 POM121CA8CG34 1229 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 C12orf77C9JDV5 145 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 FAHD2BQ6P2I3 314 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-232ENST00000641947 ZNF788Q6ZQV5 615 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 SPICQ8N5J4 248 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 FAM216BQ8N7L0 139 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 OR2AK2Q8NG84 335 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 CCL17Q92583 94 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 FAHD2AQ96GK7 314 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 CCL13Q99616 98 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 PRR13Q9NZ81 148 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 CRYBG3Q68DQ2 2970 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 LRRC30A6NM36 301 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 FCN3O75636 299 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 TK1P04183 234 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 CTSDP07339 412 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-232ENST00000641947 ZNF728P0DKX0 622 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 MUC1P15941 1255 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-232ENST00000641947 VAMP1P23763 118 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 TAS2R31P59538 309 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 TMEM128Q5BJH2 165 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 LIN54Q6MZP7 749 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 H1FOOQ8IZA3 346 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-232ENST00000641947 UXS1Q8NBZ7 420 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 OR1L1Q8NH94 360 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 MRGPRDQ8TDS7 321 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 IL1F10Q8WWZ1 152 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 VRK1Q99986 396 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-232ENST00000641947 PARP12Q9H0J9 701 aaKnown RBP14.65□□□□□ -0.06
PHGDH-232ENST00000641947 PIPOXQ9P0Z9 390 aa14.65□□□□□ -0.06
PHGDH-232ENST00000641947 LYNX1G3V0Z9 82 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 MGST3O14880 152 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 SIX6O95475 246 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 DANCRP0C864 163 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 LYNX1P0DP58 116 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 SSTR5P35346 364 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 ECI1P42126 302 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 PPOXP50336 477 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 H2BFSP57053 126 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 IL13RA1P78552 427 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 DCAF12L2Q5VW00 463 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 C12orf45Q8N5I9 185 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-232ENST00000641947 CASTOR1Q8WTX7 329 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 MITD1Q8WV92 249 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 SCGB3A2Q96PL1 93 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 ZNF436Q9C0F3 470 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-232ENST00000641947 PCDHB10Q9UN67 800 aa14.64□□□□□ -0.07
PHGDH-232ENST00000641947 IGHV1-69-2A0A0G2JMI3 117 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 NPIPB11E5RHQ5 1161 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 G3V3Q6 166 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 LGALS8O00214 317 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 CTXN2P0C2S0 81 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 HERV-K104P61576 105 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 SLC9A3R2Q15599 337 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms