RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-255	ENST00000641733	SYPL2	Q5VXT5	272 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	FAM183BP	Q6ZVS7	135 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	TMEM179B	Q7Z7N9	219 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	OR10G6	Q8NH81	332 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	C16orf78	Q8WTQ4	265 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	CEP19	Q96LK0	163 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	PGLYRP2	Q96PD5	576 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	NRIP2	Q9BQI9	281 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	BCL2L14	Q9BZR8	327 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	TRIM4	Q9C037	500 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	SLC22A4	Q9H015	551 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	MRPL40	Q9NQ50	206 aa	Known RBP	4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	TMEM100	Q9NV29	134 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	ZNF581	Q9P0T4	197 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	PROCR	Q9UNN8	238 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	HEBP2	Q9Y5Z4	205 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	EML5	Q05BV3	1969 aa		4.62	□□□□□ -1.67
CASC19-255	ENST00000641733	ABCA7	Q8IZY2	2146 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	ITPR3	Q14573	2671 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	ATG2B	Q96BY7	2078 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	THADA	Q6YHU6	1953 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	PDCD11	Q14690	1871 aa	Known RBP	4.61	□□□□□ -1.67
CASC19-255	ENST00000641733		H3BQV1	296 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	UPK2	O00526	184 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	TAAR5	O14804	337 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	GATB	O75879	557 aa	Known RBP	4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	TNNC2	P02585	160 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	CD79B	P40259	229 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	CYB561	P49447	251 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	NDUFA8	P51970	172 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	SYNJ2BP	P57105	145 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	LSM6	P62312	80 aa	Known RBP	4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	POLR2G	P62487	172 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	TIMM50	Q3ZCQ8	353 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	CASC10	Q5T4H9	136 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	METTL21C	Q5VZV1	264 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	FAM131A	Q6UXB0	335 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	CASP12	Q6UXS9	341 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	RTL4	Q6ZR62	310 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	RNF165	Q6ZSG1	346 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	RIBC1	Q8N443	379 aa	Predicted RBP	4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	C11orf72	Q8NBR9	251 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	TMEM159	Q96B96	161 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	DNAJC19	Q96DA6	116 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	RNF185	Q96GF1	192 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	FAM19A4	Q96LR4	140 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	SIGLEC12	Q96PQ1	595 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	SFXN3	Q9BWM7	321 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	MAP1LC3A	Q9H492	121 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	OPN4	Q9UHM6	478 aa		4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	UBR5	O95071	2799 aa	Predicted RBP	4.61	□□□□□ -1.67
CASC19-255	ENST00000641733	NOTCH4	Q99466	2003 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	IGHV1-69D	A0A0B4J2H0	117 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733		A0A0J9YXV3	536 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	PGRMC1	O00264	195 aa	Known RBP	4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	NDUFS5	O43920	106 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	REM1	O75628	298 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	BGLAP	P02818	100 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	ZDHHC11B	P0C7U3	371 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	MYL12A	P19105	171 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	TCN2	P20062	427 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	GABRR1	P24046	479 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	CXCR1	P25024	350 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	APLNR	P35414	380 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	MAGEA12	P43365	314 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	KIR3DL2	P43630	455 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	HBG1	P69891	147 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	HBG2	P69892	147 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	CEACAM16	Q2WEN9	425 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	FAM78A	Q5JUQ0	283 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	FAAP20	Q6NZ36	180 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	CCNYL1	Q8N7R7	359 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	GPR26	Q8NDV2	337 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	OR10C1	Q96KK4	312 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	LINC00479	Q96M42	142 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	BIRC8	Q96P09	236 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	LINC00597	Q9H2U6	94 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	TPK1	Q9H3S4	243 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	ZNF696	Q9H7X3	374 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	SLCO1B3	Q9NPD5	702 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	FARSA	Q9Y285	508 aa	Known RBP	4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	COL4A2	P08572	1712 aa		4.6	□□□□□ -1.67
CASC19-255	ENST00000641733	COL5A1	P20908	1838 aa	Predicted RBP	4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	TSC2	P49815	1807 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	COL1A2	P08123	1366 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733		A0A0J9YXY3	114 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733		A0A1B0GUA9	196 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	EPM2A	B3EWF7	344 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	PSPHP1	O15172	72 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	HIST1H1E	P10412	219 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	PSMB1	P20618	241 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	CFL1	P23528	166 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	TSPO	P30536	169 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	PYCR1	P32322	319 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	DRD3	P35462	400 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	MDH2	P40926	338 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	PI4KA	P42356	2102 aa		4.59	□□□□□ -1.67
CASC19-255	ENST00000641733	GNG10	P50151	68 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms