RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 CCDC88CQ9P219 2028 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 GMDSO60547 372 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 LTAP01374 205 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 NQO1P15559 274 aaKnown RBP0.47□□□□□ -2.33
CCDC7-211ENST00000638889 PRKACAP17612 351 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 LPAR6P43657 344 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 BCAP31P51572 246 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 ASCL4Q6XD76 172 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 CCDC121Q6ZUS5 278 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 FAM19A1Q7Z5A9 133 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 NAA40Q86UY6 237 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 ARHGAP18Q8N392 663 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 GATD1Q8NB37 220 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 BBOF1Q8ND07 529 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 DOK4Q8TEW6 326 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 GTF2H4Q92759 462 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 ZNF396Q96N95 335 aaPredicted RBP0.47□□□□□ -2.33
CCDC7-211ENST00000638889 APOL4Q9BPW4 351 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 TIMM21Q9BVV7 248 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 SUCNR1Q9BXA5 334 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 SMDT1Q9H4I9 107 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 C16orf95Q9H693 158 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 TXNL4BQ9NX01 149 aaKnown RBP0.47□□□□□ -2.33
CCDC7-211ENST00000638889 IFNKQ9P0W0 207 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 PRO2289Q9P1D8 64 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 WASHC3Q9Y3C0 194 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 TBL2Q9Y4P3 447 aaKnown RBP0.47□□□□□ -2.33
CCDC7-211ENST00000638889 V9GYY9 64 aa0.47□□□□□ -2.33
CCDC7-211ENST00000638889 YLPM1P49750 1951 aaKnown RBP0.46□□□□□ -2.34
CCDC7-211ENST00000638889 NYNRINQ9P2P1 1898 aaKnown RBP0.46□□□□□ -2.34
CCDC7-211ENST00000638889 INPP1P49441 399 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 TTPAP49638 278 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 HINT1P49773 126 aaPredicted RBP0.46□□□□□ -2.34
CCDC7-211ENST00000638889 RAB38P57729 211 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 GBE1Q04446 702 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 SPAG1Q07617 926 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 GUSBP1Q15486 140 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 ZBTB6Q15916 424 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 HES3Q5TGS1 186 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 FAM19A3Q7Z5A8 133 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 TMCO2Q7Z6W1 182 aaPredicted RBP0.46□□□□□ -2.34
CCDC7-211ENST00000638889 OR4X2Q8NGF9 303 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 OR51L1Q8NGJ5 315 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 ZNRF2Q8NHG8 242 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 MBOAT7Q96N66 472 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 UTP23Q9BRU9 249 aaKnown RBP0.46□□□□□ -2.34
CCDC7-211ENST00000638889 UPK3BQ9BT76 320 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 PECRQ9BY49 303 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 POTEKPQ9BYX7 375 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 RGCCQ9H4X1 137 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 NDUFB11Q9NX14 153 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 SDHAF2Q9NX18 166 aa0.46□□□□□ -2.34
CCDC7-211ENST00000638889 ADAMTSL1Q8N6G6 1762 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 ZNF469Q96JG9 3925 aaPredicted RBP0.45□□□□□ -2.34
CCDC7-211ENST00000638889 KDM5BQ9UGL1 1544 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 FAM183AA6NL82 134 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 RNASEK-C17orf49H0YIS7 233 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 J3QLI3 93 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 J3QQQ9 107 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 STAG3L3P0CL85 134 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 SRMP19623 302 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 CPN2P22792 545 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 CALRP27797 417 aaKnown RBP0.45□□□□□ -2.34
CCDC7-211ENST00000638889 GABRA3P34903 492 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 CBX5P45973 191 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 RPL26P61254 145 aaKnown RBP0.45□□□□□ -2.34
CCDC7-211ENST00000638889 HBG1P69891 147 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 HBG2P69892 147 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 RESP18Q5W5W9 173 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 C2orf91Q6ZV80 131 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 OLIG3Q7RTU3 272 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 ZNF283Q8N7M2 679 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 C16orf78Q8WTQ4 265 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 PEX13Q92968 403 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 MRPS24Q96EL2 167 aaKnown RBP0.45□□□□□ -2.34
CCDC7-211ENST00000638889 GLT1D1Q96MS3 346 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 PITX2Q99697 317 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 ZNF426Q9BUY5 554 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 ZNF471Q9BX82 626 aaPredicted RBP0.45□□□□□ -2.34
CCDC7-211ENST00000638889 TM6SF2Q9BZW4 377 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 CYSTM1Q9H1C7 97 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 VAPAQ9P0L0 249 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 PSMD13Q9UNM6 376 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 RPL26L1Q9UNX3 145 aaKnown RBP0.45□□□□□ -2.34
CCDC7-211ENST00000638889 MRPS16Q9Y3D3 137 aaKnown RBP0.45□□□□□ -2.34
CCDC7-211ENST00000638889 ARHGAP32A7KAX9 2087 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 PLCH2O75038 1416 aa0.45□□□□□ -2.34
CCDC7-211ENST00000638889 FN1P02751 2386 aaKnown RBP0.44□□□□□ -2.34
CCDC7-211ENST00000638889 A0A1B0GVG6 124 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 NCF1BA6NI72 391 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-211ENST00000638889 NCF1CA8MVU1 366 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-211ENST00000638889 ZNF705DP0CH99 300 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-211ENST00000638889 ZNF705BP0CI00 300 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-211ENST00000638889 PYCR1P32322 319 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 PEX19P40855 299 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 RAB2AP61019 212 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 BSPH1Q075Z2 132 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 BAXQ07812 192 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 STX4Q12846 297 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 SKP2Q13309 424 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms