RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	METTL8	Q9H825	291 aa	Known RBP	13.32	□□□□□ -0.28
CACNA1A-231	ENST00000636816	RAB18	Q9NP72	206 aa		13.32	□□□□□ -0.28
CACNA1A-231	ENST00000636816	KIF25	Q9UIL4	384 aa		13.32	□□□□□ -0.28
CACNA1A-231	ENST00000636816	WIPI2	Q9Y4P8	454 aa		13.32	□□□□□ -0.28
CACNA1A-231	ENST00000636816	IGKV1D-17	A0A075B6S4	117 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TRBV6-7	A0A0A0MS04	114 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CTXN2	P0C2S0	81 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PRDX2	P32119	198 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TNFAIP6	P98066	277 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	SHARPIN	Q9H0F6	387 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CCL28	Q9NRJ3	127 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	MBNL3	Q9NUK0	354 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PCDHB10	Q9UN67	800 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	DSCAM	O60469	2012 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	HMSD	A8MTL9	139 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816		L7N2F9	121 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	HSD17B6	O14756	317 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	LHB	P01229	141 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CFHR2	P36980	270 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TMEM187	Q14656	261 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ZNF818P	Q6ZRF7	136 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	OR10Z1	Q8NGY1	313 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	OR10J5	Q8NHC4	309 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	SLC5A7	Q9GZV3	580 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TAF9B	Q9HBM6	251 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	GCM1	Q9NP62	436 aa		13.31	□□□□□ -0.28
CACNA1A-231	ENST00000636816	DYSF	O75923	2080 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	KALRN	O60229	2985 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816		H7C1Q1	480 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CHRNB4	P30926	498 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	GLIPR1	P48060	266 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	OPCML	Q14982	345 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	OR8H1	Q8NGG4	311 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PLPPR2	Q96GM1	343 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CABLES2	Q9BTV7	478 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	DCAF16	Q9NXF7	216 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	COMMD9	Q9P000	198 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	IL19	Q9UHD0	177 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ARID1A	O14497	2285 aa		13.3	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TMEM30CP	A0ZSE6	113 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	SHISA9	B4DS77	424 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	IFNL4	K9M1U5	179 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	KCNAB3	O43448	404 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CD80	P33681	288 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	GABRA2	P47869	451 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	AP2S1	P53680	142 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	NCMAP	Q5T1S8	102 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	C11orf87	Q6NUJ2	197 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ZNF565	Q8N9K5	539 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	GLYATL2	Q8WU03	294 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TP53RK	Q96S44	253 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PARP12	Q9H0J9	701 aa	Known RBP	13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	DNAJB11	Q9UBS4	358 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	KCNIP3	Q9Y2W7	256 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816		E7EQL1	145 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	MPPED1	O15442	326 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CYB5R3	P00387	301 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	GATA4	P43694	442 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CCL8	P80075	99 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	HMGN3	Q15651	99 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	SLC35E4	Q6ICL7	350 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TMUB2	Q71RG4	321 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ZNF546	Q86UE3	836 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	OR1L1	Q8NH94	360 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	GALNT14	Q96FL9	552 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	DCTN5	Q9BTE1	182 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	NMES1	Q9C002	83 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ZDHHC8	Q9ULC8	765 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	OR2W1	Q9Y3N9	320 aa		13.29	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PKDREJ	Q9NTG1	2253 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TNFSF12	O43508	249 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ZNF737	O75373	536 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	CFD	P00746	253 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PLAU	P00749	431 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	FGL1	Q08830	312 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TESK1	Q15569	626 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	KRBOX4	Q5JUW0	171 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TEX261	Q6UWH6	196 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	MOB1B	Q7L9L4	216 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PKD1L2	Q7Z442	2459 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	TBC1D26	Q86UD7	250 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	LILRB4	Q8NHJ6	448 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	LHFPL5	Q8TAF8	219 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	RNASE6	Q93091	150 aa	Known RBP	13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	MFF	Q9GZY8	342 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	NGB	Q9NPG2	151 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	COQ3	Q9NZJ6	369 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	GSKIP	Q9P0R6	139 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816		U3KQ87	197 aa		13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1A-231	ENST00000636816	POM121C	A8CG34	1229 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	C12orf77	C9JDV5	145 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816		H0YIZ8	118 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PHF1	O43189	567 aa	Predicted RBP	13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	SFTPC	P11686	197 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	PSMB6	P28072	239 aa		13.27	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms