RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 TAS2R30P59541 319 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 RAB2AP61019 212 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 KHDC3LQ587J8 217 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 AKR1C8PQ5T2L2 129 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 SLC35E3Q7Z769 313 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 ZDHHC23Q8IYP9 409 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 CLDND2Q8NHS1 167 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 TAAR3PQ9P1P4 343 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 R4GN57 208 aa12.45□□□□□ -0.42
CLN6-215ENST00000636674 CCDC163A0A0D9SF12 145 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 HOXA5P20719 270 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 HAGHQ16775 308 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 WIPI1Q5MNZ9 446 aaPredicted RBP12.44□□□□□ -0.42
CLN6-215ENST00000636674 CDCP2Q5VXM1 449 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 PPP1R32Q7Z5V6 425 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 MKXQ8IYA7 352 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 ABHD3Q8WU67 409 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 TVP23CQ96ET8 276 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 PLK3Q9H4B4 646 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 CCL28Q9NRJ3 127 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 WSB1Q9Y6I7 421 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 CST7O76096 145 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 IGHV2-70P01814 119 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 HAAOP46952 286 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 UBE2KP61086 200 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 ELOBQ15370 118 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 ZNF880Q6PDB4 577 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 PCSK4Q6UW60 755 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 MTCH1Q9NZJ7 389 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 MIOXQ9UGB7 285 aa12.44□□□□□ -0.42
CLN6-215ENST00000636674 VPS13AQ96RL7 3174 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 DMDP11532 3685 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 A0A1B0GU03 582 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 WRBO00258 174 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 CHST1O43916 411 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 PGLYRP1O75594 196 aaPredicted RBP12.43□□□□□ -0.42
CLN6-215ENST00000636674 F2RP25116 425 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 TAGLN2P37802 199 aaKnown RBP12.43□□□□□ -0.42
CLN6-215ENST00000636674 Q0VFX4 171 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 KIAA0141Q14154 515 aaPredicted RBP12.43□□□□□ -0.42
CLN6-215ENST00000636674 ZNF429Q86V71 674 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 CYB561D1Q8N8Q1 229 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 MRPL30Q8TCC3 161 aaKnown RBP12.43□□□□□ -0.42
CLN6-215ENST00000636674 NIPSNAP3BQ9BS92 247 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 CABLES2Q9BTV7 478 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 OPA3Q9H6K4 179 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 DEPPQ9NTK1 212 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 FAM186AA6NE01 2351 aa12.43□□□□□ -0.42
CLN6-215ENST00000636674 OTOGLQ3ZCN5 2332 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 LOC102723971A0A1B0GUV8 181 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 KIAA1324LA8MWY0 1029 aaPredicted RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 B4DEV8 164 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 H0YL77 283 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 TRAPPC2LH3BP13 241 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 TXNL1O43396 289 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 ITGA3P26006 1051 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 S100GP29377 79 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 CDX1P47902 265 aaPredicted RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 GPM6AP51674 278 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 DLK1P80370 383 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 RUNX1Q01196 453 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 ZNF154Q13106 437 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 ACSF3Q4G176 576 aaPredicted RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 MRPL21Q7Z2W9 205 aaKnown RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 STX12Q86Y82 276 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 BATF2Q8N1L9 274 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 OR5A2Q8NGI9 324 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 APOBEC3DQ96AK3 386 aaPredicted RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 ZNF845Q96IR2 970 aaPredicted RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 HS3ST6Q96QI5 342 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 RAB40CQ96S21 281 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 CRIM1Q9NZV1 1036 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 ZMAT5Q9UDW3 170 aaKnown RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 NOSIPQ9Y314 301 aaKnown RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 ZFHX2Q9C0A1 2572 aaPredicted RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 LRP5LA4QPB2 252 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 NPIPB11E5RHQ5 1161 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 MRPL33O75394 65 aaKnown RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 TRAPPC6AO75865 159 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 RPS10P46783 165 aaKnown RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 DUSP3P51452 185 aaPredicted RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 ARF1P84077 181 aaKnown RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 ZNF324BQ6AW86 544 aaPredicted RBP12.42□□□□□ -0.42
CLN6-215ENST00000636674 C5orf24Q7Z6I8 188 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 TMEM217Q8N7C4 229 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 OR13D1Q8NGV5 346 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 Q8WTZ3 238 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 OR2W1Q9Y3N9 320 aa12.42□□□□□ -0.42
CLN6-215ENST00000636674 FBP1P09467 338 aa12.41□□□□□ -0.42
CLN6-215ENST00000636674 GDF1P27539 372 aa12.41□□□□□ -0.42
CLN6-215ENST00000636674 GLIPR1P48060 266 aa12.41□□□□□ -0.42
CLN6-215ENST00000636674 RPL23AP62750 156 aaKnown RBP12.41□□□□□ -0.42
CLN6-215ENST00000636674 HLA-DRB3P79483 266 aa12.41□□□□□ -0.42
CLN6-215ENST00000636674 ACER2Q5QJU3 275 aa12.41□□□□□ -0.42
CLN6-215ENST00000636674 H1FOOQ8IZA3 346 aaPredicted RBP12.41□□□□□ -0.42
CLN6-215ENST00000636674 TOLLIPQ9H0E2 274 aa12.41□□□□□ -0.42
CLN6-215ENST00000636674 IL36RNQ9UBH0 155 aa12.41□□□□□ -0.42
CLN6-215ENST00000636674 A0A0G2JRQ6 117 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms