RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ACTR3P61158 418 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 CDK5R1Q15078 307 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 ARHGAP24Q8N264 748 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 LINC00311Q8N616 119 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 MRGPRDQ8TDS7 321 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 MBOAT4Q96T53 435 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 PARP11Q9NR21 331 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 RRP15Q9Y3B9 282 aaKnown RBP13.83□□□□□ -0.2
CLN6-212ENST00000636020 SAMHD1Q9Y3Z3 626 aaKnown RBP13.83□□□□□ -0.2
CLN6-212ENST00000636020 MUC4Q99102 2169 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 SOX15O60248 233 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 RGS11O94810 467 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 CXCR4P61073 352 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 CDK5Q00535 292 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 C19orf54Q5BKX5 351 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 CCDC54Q8NEL0 328 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 OR10G2Q8NGC3 310 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 PP6455Q8WZ26 134 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 RFT1Q96AA3 541 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 C10orf35Q96D05 121 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 FEVQ99581 238 aa13.82□□□□□ -0.2
CLN6-212ENST00000636020 IGHV7-81A0A0B4J1V7 117 aa13.81□□□□□ -0.2
CLN6-212ENST00000636020 HSPB6O14558 160 aa13.81□□□□□ -0.2
CLN6-212ENST00000636020 HLA-DRB1P01911 266 aa13.81□□□□□ -0.2
CLN6-212ENST00000636020 SNRPBP14678 240 aaKnown RBP13.81□□□□□ -0.2
CLN6-212ENST00000636020 VHLP40337 213 aa13.81□□□□□ -0.2
CLN6-212ENST00000636020 CASTOR1Q8WTX7 329 aa13.81□□□□□ -0.2
CLN6-212ENST00000636020 RHOFQ9HBH0 211 aa13.81□□□□□ -0.2
CLN6-212ENST00000636020 DNAH2Q9P225 4427 aa13.81□□□□□ -0.2
CLN6-212ENST00000636020 TRAV39A0A0B4J263 110 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 SHISA3A0PJX4 238 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 CXorf65A6NEN9 183 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 NUPR2A6NF83 97 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 IGHV3-11P01762 117 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 ATF1P18846 271 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 PRKACBP22694 351 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 BLVRBP30043 206 aaPredicted RBP13.8□□□□□ -0.2
CLN6-212ENST00000636020 RAB40BQ12829 278 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 PMS2P11Q13670 270 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 MMDQ15546 238 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 SPATS1Q496A3 300 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 RSBN1Q5VWQ0 802 aaPredicted RBP13.8□□□□□ -0.2
CLN6-212ENST00000636020 C8orf31Q8N9H6 132 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 TMEM106AQ96A25 262 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 ADAT3Q96EY9 351 aaPredicted RBP13.8□□□□□ -0.2
CLN6-212ENST00000636020 SPACA5Q96QH8 159 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 BARHL1Q9BZE3 327 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 REEP1Q9H902 201 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 DNAH11Q96DT5 4516 aa13.8□□□□□ -0.2
CLN6-212ENST00000636020 TRAV24A0A0B4J272 114 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 A0A1W2PN81 502 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 H0YJX3 145 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 RPP14O95059 124 aaKnown RBP13.79□□□□□ -0.2
CLN6-212ENST00000636020 IL3RAP26951 378 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 CHRNA7P36544 502 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 PAX5Q02548 391 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 PAN3Q58A45 887 aaKnown RBP13.79□□□□□ -0.2
CLN6-212ENST00000636020 OR2T5Q6IEZ7 315 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 IL34Q6ZMJ4 242 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 OR2T29Q8NH02 315 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 CNN2Q99439 309 aaKnown RBP13.79□□□□□ -0.2
CLN6-212ENST00000636020 ADI1Q9BV57 179 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 PLEKHA3Q9HB20 300 aa13.79□□□□□ -0.2
CLN6-212ENST00000636020 TXNL1O43396 289 aa13.78□□□□□ -0.2
CLN6-212ENST00000636020 CEMP1Q6PRD7 247 aaPredicted RBP13.78□□□□□ -0.2
CLN6-212ENST00000636020 UTS2BQ765I0 119 aa13.78□□□□□ -0.2
CLN6-212ENST00000636020 SAXO1Q8IYX7 474 aa13.78□□□□□ -0.2
CLN6-212ENST00000636020 OR52M1Q8NGK5 317 aa13.78□□□□□ -0.2
CLN6-212ENST00000636020 PLPPR1Q8TBJ4 325 aa13.78□□□□□ -0.2
CLN6-212ENST00000636020 RHOVQ96L33 236 aa13.78□□□□□ -0.2
CLN6-212ENST00000636020 SLC25A19Q9HC21 320 aa13.78□□□□□ -0.2
CLN6-212ENST00000636020 FOXA2Q9Y261 457 aaPredicted RBP13.78□□□□□ -0.2
CLN6-212ENST00000636020 FBXO7Q9Y3I1 522 aa13.78□□□□□ -0.2
CLN6-212ENST00000636020 CNIH1O95406 144 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 ZNF137PP52743 207 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 CRIP2P52943 208 aaPredicted RBP13.77□□□□□ -0.21
CLN6-212ENST00000636020 ECSCRQ19T08 205 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 LCN12Q6JVE5 192 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 SLC35F2Q8IXU6 374 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 RDH10Q8IZV5 341 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 OR5D18Q8NGL1 313 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 GIPC3Q8TF64 312 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 SPSB1Q96BD6 273 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 OPALINQ96PE5 141 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 ANKRD60Q9BZ19 345 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 POMPQ9Y244 141 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 MYRFQ9Y2G1 1151 aa13.77□□□□□ -0.21
CLN6-212ENST00000636020 DNAH17Q9UFH2 4485 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 IZUMO1RA6ND01 250 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 GZMHP20718 246 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 NDPQ00604 133 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 TMEM236Q5W0B7 351 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 FAHD1Q6P587 224 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 CCDC124Q96CT7 223 aaKnown RBP13.76□□□□□ -0.21
CLN6-212ENST00000636020 RITA1Q96K30 269 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 GFOD1Q9NXC2 390 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 ERGIC3Q9Y282 383 aa13.76□□□□□ -0.21
CLN6-212ENST00000636020 LOC107986453A0A1B0GWG9 222 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 ZNF670-ZNF695F2Z2N8 137 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 C15orf65H3BRN8 121 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms