RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 BANF2Q9H503 90 aa12.78□□□□□ -0.36
CHRNA4-211ENST00000628606 LIN7BQ9HAP6 207 aa12.78□□□□□ -0.36
CHRNA4-211ENST00000628606 ZNF581Q9P0T4 197 aa12.78□□□□□ -0.36
CHRNA4-211ENST00000628606 GHRLQ9UBU3 117 aa12.78□□□□□ -0.36
CHRNA4-211ENST00000628606 TRAPPC2LQ9UL33 140 aa12.78□□□□□ -0.36
CHRNA4-211ENST00000628606 PSG11Q9UQ72 335 aa12.78□□□□□ -0.36
CHRNA4-211ENST00000628606 VWFP04275 2813 aa12.78□□□□□ -0.36
CHRNA4-211ENST00000628606 FAM90A10PA6NDY2 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A18PA6NE21 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A16PA6NEW6 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A20PA6NIJ5 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A7PA6NKC0 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A12PA8MX19 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A5PA8MXJ8 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A23PA8MXZ1 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 RGS10O43665 173 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A15PP0C7V4 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A13PP0C7W8 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A14PP0C7W9 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM90A24PP0C7X0 464 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM106CPP0CH98 169 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 HSMCR30P0CW71 290 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 MGMTP16455 207 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 BLCAPP62952 87 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 SLC35A2P78381 396 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 HABP2Q14520 560 aaPredicted RBP12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 RBM48Q5RL73 367 aaKnown RBP12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 RAB12Q6IQ22 244 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 CEACAM19Q7Z692 300 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM110DQ8TAY7 271 aaPredicted RBP12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 LEAP2Q969E1 77 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 OR5M11Q96RB7 305 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 SLC25A33Q9BSK2 321 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 ANKRD60Q9BZ19 345 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 ETAA1Q9NY74 926 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 PEX16Q9Y5Y5 336 aa12.77□□□□□ -0.37
CHRNA4-211ENST00000628606 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 SPINT2O43291 252 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 ORC5O43913 435 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 FBXO24O75426 580 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 MT-ND4P03905 459 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 UBBP0CG47 229 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 FUT3P21217 361 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 HSD17B12Q53GQ0 312 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 C6orf183Q5T699 404 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 UNQ9370/PRO34162Q6UXP9 181 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 OR52M1Q8NGK5 317 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 PHYHIPQ92561 330 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 RBM14Q96PK6 669 aaKnown RBP12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 SERTAD4Q9NUC0 356 aa12.76□□□□□ -0.37
CHRNA4-211ENST00000628606 M0QZK8 103 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 SDCBPO00560 298 aaPredicted RBP12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 CA11O75493 328 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 OR2F2O95006 317 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 TSPAN15O95858 294 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 GLAP06280 429 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 SRMP19623 302 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 RAB7AP51149 207 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 HES1Q14469 280 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 INSL4Q14641 139 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 TRAM1Q15629 374 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 SYT6Q5T7P8 510 aaPredicted RBP12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 LIPKQ5VXJ0 399 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 TRAT1Q6PIZ9 186 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 IZUMO2Q6UXV1 221 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 CFHR4Q92496 578 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM46BQ96A09 425 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 DUSP21Q9H596 190 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 RCC2Q9P258 522 aaKnown RBP12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 BLOC1S6Q9UL45 172 aa12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 LSM2Q9Y333 95 aaKnown RBP12.75□□□□□ -0.37
CHRNA4-211ENST00000628606 MEGF8Q7Z7M0 2845 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 MPIG6BO95866 241 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 IL3RAP26951 378 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 EMX1Q04741 257 aaPredicted RBP12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 IRF3Q14653 427 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 ABCA11PQ4W5N1 156 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 UTF1Q5T230 341 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 FAM27D1Q5T7N8 215 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 THNSL2Q86YJ6 484 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 OR8H3Q8N146 312 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 TMEM104Q8NE00 496 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 OR4K15Q8NH41 348 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 SGCDQ92629 289 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 TMEM203Q969S6 136 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 CNBD2Q96M20 576 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 Q96M66 194 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 ISYNA1Q9NPH2 558 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 KCNIP1Q9NZI2 227 aa12.74□□□□□ -0.37
CHRNA4-211ENST00000628606 A0A1W2PPE3 182 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 UBE2QL1A1L167 161 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 PDCD6O75340 191 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 GAPDHP04406 335 aaKnown RBP12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 LPLP06858 475 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 CRHBPP24387 322 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 PSMA1P25786 263 aaKnown RBP12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 DEFA6Q01524 100 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 NSUN5P1Q3KNT7 163 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms