RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SCGB3A2Q96PL1 93 aa9.42□□□□□ -0.9
FAM3A-221ENST00000612856 RTL8AQ9BWD3 113 aa9.42□□□□□ -0.9
FAM3A-221ENST00000612856 ERRFI1Q9UJM3 462 aaPredicted RBP9.42□□□□□ -0.9
FAM3A-221ENST00000612856 A0A0U1RQK1 487 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 TCF21O43680 179 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 BGLAPP02818 100 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 HIST1H1BP16401 226 aaKnown RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 COX7A1P24310 79 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 TAS2R31P59538 309 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 RTP5Q14D33 572 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 ADGRE4PQ86SQ3 457 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 COMMD1Q8N668 190 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 OR52N4Q8NGI2 321 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 APOBEC3DQ96AK3 386 aaPredicted RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 LRFN5Q96NI6 719 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 CACFD1Q9UGQ2 172 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 KLHDC2Q9Y2U9 406 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 A0A1W2PQD3 144 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 NGFP01138 241 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 MBPP02686 304 aaPredicted RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 PPP1CBP62140 327 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 RPS4XP62701 263 aaKnown RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 RPL23AP62750 156 aaKnown RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 MFGE8Q08431 387 aaPredicted RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 AADACL3Q5VUY0 350 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 ASB10Q8WXI3 467 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 SAT2Q96F10 170 aaPredicted RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 TIMD4Q96H15 378 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 CABLES2Q9BTV7 478 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 CHODLQ9H9P2 273 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 MRM2Q9UI43 246 aaKnown RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 STARD10Q9Y365 291 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 MUC22E2RYF6 1773 aaPredicted RBP9.41□□□□□ -0.9
FAM3A-221ENST00000612856 IGHV3OR15-7A0A075B7D8 119 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 NKX2-6A6NCS4 301 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 SLC17A2O00624 439 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 EGR4Q05215 589 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 PRAMEF6Q5VXH4 476 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 DMRTA1Q5VZB9 504 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 ZNF826PQ6ZT77 177 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 OR6X1Q8NH79 312 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 SLC25A40Q8TBP6 338 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 CMTM3Q96MX0 182 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 NICN1Q9BSH3 213 aa9.41□□□□□ -0.9
FAM3A-221ENST00000612856 TMPRSS2O15393 492 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 HOXA5P20719 270 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 FOXG1P55316 489 aaPredicted RBP9.4□□□□□ -0.9
FAM3A-221ENST00000612856 RPS16P62249 146 aaKnown RBP9.4□□□□□ -0.9
FAM3A-221ENST00000612856 Q0VFX4 171 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 GNMTQ14749 295 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 NCR3LG1Q68D85 454 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 OR8B12Q8NGG6 310 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 RARRES2Q99969 163 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 ZNF426Q9BUY5 554 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 SLC26A1Q9H2B4 701 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 C19orf12Q9NSK7 152 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 DLL3Q9NYJ7 618 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 H0YL77 283 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 HSD17B6O14756 317 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 DFFBO76075 338 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 DUS4LO95620 317 aaKnown RBP9.4□□□□□ -0.9
FAM3A-221ENST00000612856 PGA4P0DJD7 388 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 PGA5P0DJD9 388 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 AGAP20933 346 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 S100A7P31151 101 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 ZNF880Q6PDB4 577 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 ZNF429Q86V71 674 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 SGPP2Q8IWX5 399 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 CMTM1Q8IZ96 169 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 OR13C8Q8NGS7 320 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 ADAMTS17Q8TE56 1095 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 GPX8Q8TED1 209 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 SDSLQ96GA7 329 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 MMP9P14780 707 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 KLF3P57682 345 aaPredicted RBP9.4□□□□□ -0.9
FAM3A-221ENST00000612856 RPS23P62266 143 aaKnown RBP9.4□□□□□ -0.9
FAM3A-221ENST00000612856 PRB3Q04118 309 aaPredicted RBP9.4□□□□□ -0.9
FAM3A-221ENST00000612856 PRSS54Q6PEW0 395 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 MOGAT3Q86VF5 341 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 C17orf82Q86X59 251 aaPredicted RBP9.4□□□□□ -0.9
FAM3A-221ENST00000612856 ZNF695Q8IW36 515 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 ZNF524Q96C55 264 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 PPP1R3CQ9UQK1 317 aa9.4□□□□□ -0.9
FAM3A-221ENST00000612856 LOC102724200A0A096LPH7 203 aaPredicted RBP9.39□□□□□ -0.91
FAM3A-221ENST00000612856 LY6G6EA0A0G2JKS1 128 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 CD300LBA8K4G0 201 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 FAM157AC9JC47 383 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 CST4P01036 141 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 GABRA4P48169 554 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 TNFAIP6P98066 277 aaPredicted RBP9.39□□□□□ -0.91
FAM3A-221ENST00000612856 OR5I1Q13606 314 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 ADIRFQ15847 76 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 TMEM128Q5BJH2 165 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 CLEC18BQ6UXF7 455 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 C1orf87Q8N0U7 546 aa9.39□□□□□ -0.91
FAM3A-221ENST00000612856 ZNF441Q8N8Z8 693 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms