RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 OR13A1Q8NGR1 328 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 OR10X1Q8NGY0 326 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 KCNG3Q8TAE7 436 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 TOMM40LQ969M1 308 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 ARL11Q969Q4 196 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 TMEM203Q969S6 136 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 AJUBAQ96IF1 538 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 KIRREL1Q96J84 757 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 MGLLQ99685 303 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 URM1Q9BTM9 101 aaKnown RBP9.97□□□□□ -0.81
CBWD3-208ENST00000612050 MMP28Q9H239 520 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 BANF2Q9H503 90 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 ZNF286AQ9HBT8 521 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 ACOT13Q9NPJ3 140 aa9.97□□□□□ -0.81
CBWD3-208ENST00000612050 LSM2Q9Y333 95 aaKnown RBP9.97□□□□□ -0.81
CBWD3-208ENST00000612050 BUB1B-PAK6H3BSN5 160 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 SDCBPO00560 298 aaPredicted RBP9.96□□□□□ -0.82
CBWD3-208ENST00000612050 PIN1P1O15428 100 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 ORC5O43913 435 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 MMP23AO75900 390 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 BPNT1O95861 308 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 MPIG6BO95866 241 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 FAM106CPP0CH98 169 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 CPEP16870 476 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 GABARAPL2P60520 117 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 MADCAM1Q13477 382 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 TPBGQ13641 420 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 TBCEQ15813 527 aaPredicted RBP9.96□□□□□ -0.82
CBWD3-208ENST00000612050 C17orf58Q2M2W7 97 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 KIAA2026Q5HYC2 2103 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 PRR31Q5SQ13 230 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 UNQ9370/PRO34162Q6UXP9 181 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 OR6M1Q8NGM8 313 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 PLPPR1Q8TBJ4 325 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 FAM46BQ96A09 425 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 TMEM59Q9BXS4 323 aa9.96□□□□□ -0.82
CBWD3-208ENST00000612050 DNHD1Q96M86 4753 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 A0A1W2PP11 408 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 J3QR06 171 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 M0QZK8 103 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 PDCD5O14737 125 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 PDCD6O75340 191 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 IGLV1-47P01700 117 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 UCHL1P09936 223 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 MYL9P24844 172 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 PAX6P26367 422 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 SSTR5P35346 364 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 GNG10P50151 68 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 RAB7AP51149 207 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 RAB13P51153 203 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 PROK1P58294 105 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 NKAPLQ5M9Q1 402 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 TPTE2P1Q5T6R2 138 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 ZNF497Q6ZNH5 498 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 OR52M1Q8NGK5 317 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 RFESDQ8TAC1 157 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 CCDC107Q8WV48 283 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 CITED1Q99966 193 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 LRRC42Q9Y546 428 aa9.95□□□□□ -0.82
CBWD3-208ENST00000612050 A6NDX4 124 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 NPIPB11E5RHQ5 1161 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 ARSBP15848 533 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 CALRP27797 417 aaKnown RBP9.94□□□□□ -0.82
CBWD3-208ENST00000612050 HES1Q14469 280 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 HERPUD1Q15011 391 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 C2orf68Q2NKX9 166 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 SYT6Q5T7P8 510 aaPredicted RBP9.94□□□□□ -0.82
CBWD3-208ENST00000612050 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 OR8H3Q8N146 312 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 DYNAPQ8N1N2 210 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 PRR18Q8N4B5 295 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 FCGR1BQ92637 280 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 Q96M66 194 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 LINC00574Q9H8X3 128 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 LIN7BQ9HAP6 207 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 ABRACLQ9P1F3 81 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 RCC2Q9P258 522 aaKnown RBP9.94□□□□□ -0.82
CBWD3-208ENST00000612050 GNG12Q9UBI6 72 aa9.94□□□□□ -0.82
CBWD3-208ENST00000612050 UBE2QL1A1L167 161 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 MT-ND4P03905 459 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 VSIG10L2P0DP72 767 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 VDAC2P45880 294 aaPredicted RBP9.93□□□□□ -0.82
CBWD3-208ENST00000612050 MRPS15P82914 257 aaKnown RBP9.93□□□□□ -0.82
CBWD3-208ENST00000612050 INSL4Q14641 139 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 RAB11BQ15907 218 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 Q3ZCU0 254 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 C1orf100Q5SVJ3 147 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 FAM27D1Q5T7N8 215 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 ZNF554Q86TJ5 538 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 SGCDQ92629 289 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 SLC25A33Q9BSK2 321 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 YTHDF1Q9BYJ9 559 aaKnown RBP9.93□□□□□ -0.82
CBWD3-208ENST00000612050 CHMP1AQ9HD42 196 aaPredicted RBP9.93□□□□□ -0.82
CBWD3-208ENST00000612050 PSG11Q9UQ72 335 aa9.93□□□□□ -0.82
CBWD3-208ENST00000612050 TXNL1O43396 289 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 CHST1O43916 411 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 SC5DO75845 299 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 RGS11O94810 467 aa9.92□□□□□ -0.82
CBWD3-208ENST00000612050 GAPDHP04406 335 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms