RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 AQP10Q96PS8 301 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 WFDC1Q9HC57 220 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 KCNIP1Q9NZI2 227 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 CLEC18AA5D8T8 446 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 SHISA7A6NL88 538 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 GJE1A6NN92 205 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 MELTFP08582 738 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 HMGN3Q15651 99 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 FDX2Q6P4F2 183 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 CLEC18CQ8NCF0 446 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 SHDQ96IW2 340 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 PLEKHF2Q9H8W4 249 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 GNG12Q9UBI6 72 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 PPP5D1E7EU14 171 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 AQP7O14520 342 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 SYNGR1O43759 233 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 NPIPB7O75200 414 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 IL2RAP01589 272 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 HEXAP06865 529 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 RFPL3SP0C7P2 107 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 PGA5P0DJD9 388 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 SRFP11831 508 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 PSG4Q00888 419 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 DHRS7BQ6IAN0 325 aaPredicted RBP8.3□□□□□ -1.08
TPM1-233ENST00000610733 FAM166AQ6J272 317 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 COMMD1Q8N668 190 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 UTP23Q9BRU9 249 aaKnown RBP8.3□□□□□ -1.08
TPM1-233ENST00000610733 FAM103A1Q9BTL3 118 aaKnown RBP8.3□□□□□ -1.08
TPM1-233ENST00000610733 CDH20Q9HBT6 801 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 RPH3ALQ9UNE2 315 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 TICRRQ7Z2Z1 1910 aa8.3□□□□□ -1.08
TPM1-233ENST00000610733 GTF3C1Q12789 2109 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 IGHV5-10-1A0A0J9YXX1 117 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 A0A1W2PQM1 296 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 BTBD17A6NE02 478 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 PRR19A6NJB7 356 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 AQP7P3A6NL99 342 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 PROB1E7EW31 1015 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 IFNA1P01562 189 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 LTBRP36941 435 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 TMPRSS7Q7RTY8 843 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 TMEM252Q8N6L7 170 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 SRXN1Q9BYN0 137 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 PARP11Q9NR21 331 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 CACFD1Q9UGQ2 172 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 IGKV3D-11A0A0A0MRZ8 115 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 TMEM127O75204 238 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 SNCAP37840 140 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 HOXA4Q00056 320 aaPredicted RBP8.29□□□□□ -1.08
TPM1-233ENST00000610733 RABEPKQ7Z6M1 372 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 TUSC5Q8IXB3 177 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 DMRTC2Q8IXT2 367 aaPredicted RBP8.29□□□□□ -1.08
TPM1-233ENST00000610733 SMRP1Q8NCR6 262 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 ASB13Q8WXK3 278 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 EDEM2Q9BV94 578 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 P2RY1P47900 373 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 PCBD1P61457 104 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 RTP5Q14D33 572 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 HIKESHIQ53FT3 197 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 CLEC2AQ6UVW9 174 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 LHFPL2Q6ZUX7 228 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 REC114Q7Z4M0 266 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 SKA3Q8IX90 412 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 BARX1Q9HBU1 254 aaPredicted RBP8.29□□□□□ -1.08
TPM1-233ENST00000610733 IGSF23A1L1A6 192 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 PLA2G5P39877 138 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 H3F3AP84243 136 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 CLN3Q13286 438 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 FGFBP3Q8TAT2 258 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 MALSU1Q96EH3 234 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 SAMD10Q9BYL1 202 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 ARV1Q9H2C2 271 aa8.29□□□□□ -1.08
TPM1-233ENST00000610733 HEYLQ9NQ87 328 aaPredicted RBP8.29□□□□□ -1.08
TPM1-233ENST00000610733 TRANK1O15050 2925 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 COLCA2A8K830 154 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 LAMTOR5O43504 91 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 ACTL6BO94805 426 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 FAM157CP0CG43 387 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 PAX6P26367 422 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 NAAAQ02083 359 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 SURF2Q15527 256 aaPredicted RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 NCR3LG1Q68D85 454 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 RTL6Q6ICC9 239 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 SLC25A47Q6Q0C1 308 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 ZDHHC23Q8IYP9 409 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 APH1AQ96BI3 265 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 NTNG2Q96CW9 530 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 V9GYS6 101 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 CRYM-AS1A6NIL9 109 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 VAMP5O95183 116 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 CEACAM6P40199 344 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 FUT6P51993 359 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 HBG1P69891 147 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 HBG2P69892 147 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 SLC35B1P78383 322 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 GAMTQ14353 236 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 PDLIM3Q53GG5 364 aaPredicted RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 ZNF818PQ6ZRF7 136 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 FAM185AQ8N0U4 392 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms