RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 HTR1DP28221 377 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 SSTR5P35346 364 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 UNC119Q13432 240 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 SSX2Q16385 188 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 C22orf42Q6IC83 251 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 OR2W3Q7Z3T1 314 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 DYNAPQ8N1N2 210 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 C3orf56Q8N813 242 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 OR10A7Q8NGE5 316 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 OR4F5Q8NH21 305 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 NDNFQ8TB73 568 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 CCDC107Q8WV48 283 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 TAF15Q92804 592 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM28-215ENST00000601150 NEDD4LQ96PU5 975 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 TM2D1Q9BX74 207 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 KCNK15Q9H427 330 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 C1RLQ9NZP8 487 aa13.64□□□□□ -0.23
TRIM28-215ENST00000601150 UBE2QL1A1L167 161 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 VGLL3A8MV65 326 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 NDUFA7O95182 113 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 IGLV1-47P01700 117 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 CHATP28329 748 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 PRRX1P54821 245 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 RAG2P55895 527 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 FAM189A2Q15884 450 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 SYT6Q5T7P8 510 aaPredicted RBP13.63□□□□□ -0.23
TRIM28-215ENST00000601150 OR4P4Q8NGL7 312 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 RFESDQ8TAC1 157 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 URM1Q9BTM9 101 aaKnown RBP13.63□□□□□ -0.23
TRIM28-215ENST00000601150 TRAPPC2LQ9UL33 140 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 STUB1Q9UNE7 303 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 HILPDAQ9Y5L2 63 aa13.63□□□□□ -0.23
TRIM28-215ENST00000601150 SHISA3A0PJX4 238 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 ORC5O43913 435 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 TNFAIP8O95379 198 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 FGF9P31371 208 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-215ENST00000601150 RELBQ01201 579 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 NEDD8Q15843 81 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 LTC4SQ16873 150 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 PLA1AQ53H76 456 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 NKAPLQ5M9Q1 402 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 HES5Q5TA89 166 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 DHRS7BQ6IAN0 325 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-215ENST00000601150 SLC16A12Q6ZSM3 486 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 GAPTQ8N292 157 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 OR51D1Q8NGF3 324 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 OR9G1Q8NH87 305 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 ARL11Q969Q4 196 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 CREB3L1Q96BA8 519 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 FAM3DQ96BQ1 224 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 NICN1Q9BSH3 213 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 ABCB10Q9NRK6 738 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 TXNL4BQ9NX01 149 aaKnown RBP13.62□□□□□ -0.23
TRIM28-215ENST00000601150 DPM3Q9P2X0 92 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 STEAP1Q9UHE8 339 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 SSR3Q9UNL2 185 aa13.62□□□□□ -0.23
TRIM28-215ENST00000601150 LEUTXA8MZ59 168 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 C15orf65H3BRN8 121 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 RAB3BP20337 219 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 MDKP21741 143 aaPredicted RBP13.61□□□□□ -0.23
TRIM28-215ENST00000601150 CFPP27918 469 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 CEACAM3P40198 252 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 DYNLT3P51808 116 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 CLDN12P56749 244 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 OR10A3P58181 314 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 LY6EQ16553 131 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 HLA-DRB5Q30154 266 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 UTF1Q5T230 341 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 C6orf183Q5T699 404 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 TRAT1Q6PIZ9 186 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 OR4K15Q8NH41 348 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 PIFOQ8TCI5 191 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 LPAR5Q9H1C0 372 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 BEX1Q9HBH7 125 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 RAB9BQ9NP90 201 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 FBLN5Q9UBX5 448 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 MMP24Q9Y5R2 645 aa13.61□□□□□ -0.23
TRIM28-215ENST00000601150 DNHD1Q96M86 4753 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 A0A087WXM4 84 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 A0A1B0GUS0 222 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 IFITM5A6NNB3 132 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 POM121CA8CG34 1229 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 BUB1B-PAK6H3BSN5 160 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 BLVRBP30043 206 aaPredicted RBP13.6□□□□□ -0.23
TRIM28-215ENST00000601150 C2orf76Q3KRA6 126 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 LIAT1Q6ZQX7 453 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 C6orf201Q7Z4U5 140 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 TSPAN14Q8NG11 270 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 OR52M1Q8NGK5 317 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 LEAP2Q969E1 77 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 SULT4A1Q9BR01 284 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 FAAP24Q9BTP7 215 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 MMP28Q9H239 520 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 RAB18Q9NP72 206 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 PSG11Q9UQ72 335 aa13.6□□□□□ -0.23
TRIM28-215ENST00000601150 AMMECR1Q9Y4X0 333 aaPredicted RBP13.6□□□□□ -0.23
TRIM28-215ENST00000601150 A0A0A6YYD4 124 aa13.59□□□□□ -0.23
TRIM28-215ENST00000601150 C12orf77C9JDV5 145 aa13.59□□□□□ -0.23
TRIM28-215ENST00000601150 J3QR06 171 aa13.59□□□□□ -0.23
TRIM28-215ENST00000601150 HAX1O00165 279 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms