RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 KCNIP3Q9Y2W7 256 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 PCNX1Q96RV3 2341 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 CTXN2P0C2S0 81 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 SHEQ5VZ18 495 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 GGNBP1Q5YKI7 109 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 ZNF818PQ6ZRF7 136 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 OR4A4PQ8NGN8 299 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 GLYATL2Q8WU03 294 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 VRK1Q99986 396 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 GSKIPQ9P0R6 139 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 SPEF1Q9Y4P9 236 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 TRBV6-7A0A0A0MS04 114 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 A0A0D9SG52 128 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 hCG_1807616A0A1W2PRN6 198 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 PTBP3O95758 552 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 ZNF345Q14585 488 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 ACOT7LQ6ZUV0 252 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 MSI2Q96DH6 328 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 TP53RKQ96S44 253 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 GPHA2Q96T91 129 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 CABLES2Q9BTV7 478 aa14.35□□□□□ -0.11
SHKBP1-216ENST00000598201 ARID1AO14497 2285 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 C16orf97H3BN30 126 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 MPPED1O15442 326 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 OR2F2O95006 317 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 LMO1P25800 156 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 CD40P25942 277 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 KLF3P57682 345 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 OR2F1Q13607 317 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 RAB32Q13637 225 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 FIP1L1Q6UN15 594 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 GALNT11Q8NCW6 608 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 LHFPL5Q8TAF8 219 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 UBALD1Q8TB05 177 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 RRNAD1Q96FB5 475 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 SLC5A7Q9GZV3 580 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 OR5AC2Q9NZP5 309 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 JKAMPQ9P055 326 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 OR1A1Q9P1Q5 309 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 PCDHB10Q9UN67 800 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 NBASA2RRP1 2371 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 CHD3Q12873 2000 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 PHF1O43189 567 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 CD200P41217 278 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 IAH1Q2TAA2 248 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 ALKAL2Q6UX46 152 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 LIAT1Q6ZQX7 453 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 LYZL2Q7Z4W2 148 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 CCDC71LQ8N9Z2 235 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 LRRC29Q8WV35 223 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 IL1F10Q8WWZ1 152 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 DCUN1D4Q92564 292 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 SUCNR1Q9BXA5 334 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 CCL28Q9NRJ3 127 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 ELOVL5Q9NYP7 299 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 METRNQ9UJH8 293 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 TRAPPC2LQ9UL33 140 aa14.34□□□□□ -0.11
SHKBP1-216ENST00000598201 IGLV3-9A0A075B6K5 115 aa14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 SPDEFO95238 335 aa14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 H1FOOQ8IZA3 346 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 PRR18Q8N4B5 295 aa14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 ZNF565Q8N9K5 539 aa14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 OR10J5Q8NHC4 309 aa14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 C18orf12Q96KH6 178 aa14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 MRPL37Q9BZE1 423 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 TAAR3PQ9P1P4 343 aa14.33□□□□□ -0.12
SHKBP1-216ENST00000598201 H7C1Q1 480 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 HSD17B6O14756 317 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 B3GALNT1O75752 331 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 EGR1P18146 543 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 CLLU1Q5K131 121 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 PRSS54Q6PEW0 395 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 TBC1D26Q86UD7 250 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 SLC51BQ86UW2 128 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 LRTM2Q8N967 370 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 USB1Q9BQ65 265 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 MBNL3Q9NUK0 354 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 WIPI2Q9Y4P8 454 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 PLCE1Q9P212 2302 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 C3orf85A0A1B0GTC6 90 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 GPR31O00270 319 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 IFNA21P01568 189 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 THBDP07204 575 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 LYL1P12980 280 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 MOB1BQ7L9L4 216 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 INO80EQ8NBZ0 244 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 OR2V2Q96R30 315 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 GSX2Q9BZM3 304 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 OR2W1Q9Y3N9 320 aa14.32□□□□□ -0.12
SHKBP1-216ENST00000598201 ZNF462Q96JM2 2506 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 MSGN1A6NI15 193 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 POM121CA8CG34 1229 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 BCL2L11O43521 198 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 SPRY3O43610 288 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 S100A10P60903 97 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 RND3P61587 244 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 MZT1Q08AG7 82 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 WFDC8Q8IUA0 241 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 FAM185AQ8N0U4 392 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms