RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TRIM77I1YAP6 450 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 CGB3P0DN86 165 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 CGB7P0DN87 165 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 RAB6AP20340 208 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 GZMHP20718 246 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 NFYBP25208 207 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 SSTR5P35346 364 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 TGFBR1P36897 503 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 GDNFP39905 211 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 PLA2G7Q13093 441 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 ZDHHC22Q8N966 263 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 RFESDQ8TAC1 157 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 DUX5Q96PT3 197 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 CLEC7AQ9BXN2 247 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 ESM1Q9NQ30 184 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 IDI2-AS1Q9NZ38 188 aa16.01■□□□□ 0.15
SHKBP1-214ENST00000597396 FAM172BPA6NC97 362 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 DNAJC9-AS1A6NH13 148 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 EFNB2P52799 333 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 LTC4SQ16873 150 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 C6orf183Q5T699 404 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 IDNKQ5T6J7 187 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 ZNF626Q68DY1 528 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 BAIAP2L2Q6UXY1 529 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 Q6YL49 198 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 Q6ZTK2 550 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 GPR141Q7Z602 305 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 OR11H6Q8NGC7 330 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 ARL11Q969Q4 196 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 KIRREL1Q96J84 757 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 CYYR1Q96J86 154 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 PRDM13Q9H4Q3 707 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 RAB9BQ9NP90 201 aa16■□□□□ 0.15
SHKBP1-214ENST00000597396 METTL21EPA6NDL7 271 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 ODF3BA8MYP8 253 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 HOXA3O43365 443 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 ORC5O43913 435 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 MELTFP08582 738 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 SNRPBP14678 240 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 TRAT1Q6PIZ9 186 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 RTN4RL2Q86UN3 420 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 GAPTQ8N292 157 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 ABHD12Q8N2K0 398 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 LGALS14Q8TCE9 139 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 PTX4Q96A99 478 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 ARHGAP5-AS1Q96IT6 56 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 ZMAT3Q9HA38 289 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 CHMP1AQ9HD42 196 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 HSF4Q9ULV5 492 aa15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 TBL2Q9Y4P3 447 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-214ENST00000597396 NPIPB11E5RHQ5 1161 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 TOR1AO14656 332 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 TFAP2AP05549 437 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 ALDH3B2P48448 385 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 SERPINB10P48595 397 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 TMEM50BP56557 158 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 NCS1P62166 190 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 UBA52P62987 128 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 LDLRAD3Q86YD5 345 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 CROCCP3Q8IVE0 287 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 OR10A7Q8NGE5 316 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 UBALD1Q8TB05 177 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 MRPL30Q8TCC3 161 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 PECRQ9BY49 303 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 ATG5Q9H1Y0 275 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 LINC00574Q9H8X3 128 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 ZNF286AQ9HBT8 521 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 TNFRSF19Q9NS68 423 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 KCNIP1Q9NZI2 227 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 ZNRD1Q9P1U0 126 aa15.98■□□□□ 0.15
SHKBP1-214ENST00000597396 FOXI3A8MTJ6 420 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 SPINT2O43291 252 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 RCC1P18754 421 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 CD34P28906 385 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 VBP1P61758 197 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 SLC9A3R2Q15599 337 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 KRTAP24-1Q3LI83 254 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 GPR107Q5VW38 600 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 LHFPL4Q7Z7J7 247 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 ANKRD13BQ86YJ7 626 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 OR10R2Q8NGX6 335 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 NDNFQ8TB73 568 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 SETD6Q8TBK2 473 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 ZNF596Q8TC21 504 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 C17orf50Q8WW18 174 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 SSMEM1Q8WWF3 244 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 RAB3CQ96E17 227 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 AK3Q9UIJ7 227 aa15.97■□□□□ 0.15
SHKBP1-214ENST00000597396 A0A087X0M5 115 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 A0A1B0GX30 115 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 BTBD17A6NE02 478 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 C12orf77C9JDV5 145 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 C15orf65H3BRN8 121 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 RPS19P39019 145 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 PRRX1P54821 245 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 SCAND1P57086 179 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 MOGAT2Q3SYC2 334 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 MINOS1Q5TGZ0 78 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 PRR18Q8N4B5 295 aa15.96■□□□□ 0.15
SHKBP1-214ENST00000597396 BEND2Q8NDZ0 799 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms