RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ANK2Q01484 3957 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 SHISA3A0PJX4 238 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 IFITM5A6NNB3 132 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 NPIPB11E5RHQ5 1161 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 ORC5O43913 435 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 MT-ND4P03905 459 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 HKR1P10072 659 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 CHATP28329 748 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 SSTR5P35346 364 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 COMPP49747 757 aaPredicted RBP9.65□□□□□ -0.86
LIG3-213ENST00000590630 OR10A3P58181 314 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 LRRC75BQ2VPJ9 315 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 LHFPL4Q7Z7J7 247 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 TPRA1Q86W33 373 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 OR51D1Q8NGF3 324 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 CREB3L1Q96BA8 519 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 RAB9BQ9NP90 201 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 TNFRSF19Q9NS68 423 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 IDI2-AS1Q9NZ38 188 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 VPREB3Q9UKI3 123 aa9.65□□□□□ -0.86
LIG3-213ENST00000590630 TRAV39A0A0B4J263 110 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 FAM181BA6NEQ2 426 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 TOR1AO14656 332 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 IGLV1-47P01700 117 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 CRYBA1P05813 215 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 CD36P16671 472 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 NFYBP25208 207 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 HTR1DP28221 377 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 BLVRBP30043 206 aaPredicted RBP9.64□□□□□ -0.87
LIG3-213ENST00000590630 GDNFP39905 211 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 PRRX1P54821 245 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 CLDN12P56749 244 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 FOXL1Q12952 345 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 FAM189A2Q15884 450 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 C2orf76Q3KRA6 126 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 TIMM50Q3ZCQ8 353 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 NKAPLQ5M9Q1 402 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 C6orf183Q5T699 404 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 HES5Q5TA89 166 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 TRAT1Q6PIZ9 186 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 BAIAP2L2Q6UXY1 529 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 GDPGP1Q6ZNW5 385 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 SLC16A12Q6ZSM3 486 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 FAM89BQ8N5H3 189 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 OR4P4Q8NGL7 312 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 NDNFQ8TB73 568 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 KCTD7Q96MP8 289 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 SSX3Q99909 188 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 CHCHD6Q9BRQ6 235 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 NICN1Q9BSH3 213 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 LPAR5Q9H1C0 372 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 OR51E2Q9H255 320 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 ZNF286AQ9HBT8 521 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 TRAPPC2LQ9UL33 140 aa9.64□□□□□ -0.87
LIG3-213ENST00000590630 UBE2QL1A1L167 161 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 FAM172BPA6NC97 362 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 TRIM64CA6NLI5 447 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 NOTOA8MTQ0 251 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 C15orf65H3BRN8 121 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 H3BUX3 64 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 LDLRAD4O15165 306 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 GPR137BO60478 399 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 GADD45AP24522 165 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 CEACAM3P40198 252 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 SSX2Q16385 188 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 HLA-DRB5Q30154 266 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 TMEM30BQ3MIR4 351 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 LDLRAD2Q5SZI1 272 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 C6orf201Q7Z4U5 140 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 ZNF554Q86TJ5 538 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 NR2C2APQ86WQ0 139 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 OR52M1Q8NGK5 317 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 OR4K15Q8NH41 348 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 OR9G1Q8NH87 305 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 RFESDQ8TAC1 157 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 CCDC107Q8WV48 283 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 ARL11Q969Q4 196 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 SULT4A1Q9BR01 284 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 LIN7BQ9HAP6 207 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 MBNL3Q9NUK0 354 aaKnown RBP9.63□□□□□ -0.87
LIG3-213ENST00000590630 PLEKHJ1Q9NW61 149 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 DPM3Q9P2X0 92 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 RAB22AQ9UL26 194 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 HSF4Q9ULV5 492 aa9.63□□□□□ -0.87
LIG3-213ENST00000590630 A0A0A6YYD4 124 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 LOC100506127A0A0U1RQW1 187 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 TMEM272A0A1B0GTI8 110 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 LEUTXA8MZ59 168 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 C12orf77C9JDV5 145 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 SPINT2O43291 252 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 JUNBP17275 347 aaPredicted RBP9.62□□□□□ -0.87
LIG3-213ENST00000590630 RAB6AP20340 208 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 DYNLT3P51808 116 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 ARHGDIBP52566 201 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 C12orf54Q6X4T0 127 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 DYNAPQ8N1N2 210 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 OR56B1Q8NGI3 324 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 MRPL30Q8TCC3 161 aaKnown RBP9.62□□□□□ -0.87
LIG3-213ENST00000590630 PTX4Q96A99 478 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms