RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 DYNC1I2Q13409 638 aaKnown RBP17.35■□□□□ 0.37
ATG4D-212ENST00000590096 C6orf183Q5T699 404 aa17.35■□□□□ 0.37
ATG4D-212ENST00000590096 ZDHHC22Q8N966 263 aa17.35■□□□□ 0.37
ATG4D-212ENST00000590096 OR11H6Q8NGC7 330 aa17.35■□□□□ 0.37
ATG4D-212ENST00000590096 OR4K15Q8NH41 348 aa17.35■□□□□ 0.37
ATG4D-212ENST00000590096 FAAP24Q9BTP7 215 aa17.35■□□□□ 0.37
ATG4D-212ENST00000590096 IDI2-AS1Q9NZ38 188 aa17.35■□□□□ 0.37
ATG4D-212ENST00000590096 METTL21EPA6NDL7 271 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 DNAJC9-AS1A6NH13 148 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 NFYBP25208 207 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 SSTR5P35346 364 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 TGFBR1P36897 503 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 PLA2G7Q13093 441 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 ZNF626Q68DY1 528 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 TRAT1Q6PIZ9 186 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 Q6YL49 198 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 RTN4RL2Q86UN3 420 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 GAPTQ8N292 157 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 TMEM158Q8WZ71 300 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 PTX4Q96A99 478 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 KIRREL1Q96J84 757 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 MDFIQ99750 246 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 LINC00574Q9H8X3 128 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 ZMAT3Q9HA38 289 aaKnown RBP17.34■□□□□ 0.37
ATG4D-212ENST00000590096 RAB9BQ9NP90 201 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 ESM1Q9NQ30 184 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 HSF4Q9ULV5 492 aa17.34■□□□□ 0.37
ATG4D-212ENST00000590096 FAM172BPA6NC97 362 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 ODF3BA8MYP8 253 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 ORC5O43913 435 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 GDNFP39905 211 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 EFNB2P52799 333 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 IDNKQ5T6J7 187 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 Q6ZTK2 550 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 GPR141Q7Z602 305 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 ABHD12Q8N2K0 398 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 OR10A7Q8NGE5 316 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 RFESDQ8TAC1 157 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 ARL11Q969Q4 196 aa17.33■□□□□ 0.36
ATG4D-212ENST00000590096 CHMP1AQ9HD42 196 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-212ENST00000590096 TBL2Q9Y4P3 447 aaKnown RBP17.33■□□□□ 0.36
ATG4D-212ENST00000590096 NPIPB11E5RHQ5 1161 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 HOXA3O43365 443 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-212ENST00000590096 MELTFP08582 738 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 SNRPBP14678 240 aaKnown RBP17.32■□□□□ 0.36
ATG4D-212ENST00000590096 UBA52P62987 128 aaKnown RBP17.32■□□□□ 0.36
ATG4D-212ENST00000590096 LTC4SQ16873 150 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 BAIAP2L2Q6UXY1 529 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 LDLRAD3Q86YD5 345 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 CROCCP3Q8IVE0 287 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 MRPL30Q8TCC3 161 aaKnown RBP17.32■□□□□ 0.36
ATG4D-212ENST00000590096 LGALS14Q8TCE9 139 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 ZFAND2BQ8WV99 257 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 SSMEM1Q8WWF3 244 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 ARHGAP5-AS1Q96IT6 56 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 DUX5Q96PT3 197 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 KCNIP1Q9NZI2 227 aa17.32■□□□□ 0.36
ATG4D-212ENST00000590096 FOXI3A8MTJ6 420 aaPredicted RBP17.31■□□□□ 0.36
ATG4D-212ENST00000590096 RNF212BA8MTL3 300 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 TOR1AO14656 332 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 SPINT2O43291 252 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 TMEM127O75204 238 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 TFAP2AP05549 437 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 CD34P28906 385 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 ALDH3B2P48448 385 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 SERPINB10P48595 397 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 TMEM50BP56557 158 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 SCAND1P57086 179 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 SLC9A3R2Q15599 337 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 ANKRD13BQ86YJ7 626 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 OR10R2Q8NGX6 335 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 ZNF596Q8TC21 504 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 RAB3CQ96E17 227 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 CYYR1Q96J86 154 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 PECRQ9BY49 303 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 DPAGT1Q9H3H5 408 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 RIMS4Q9H426 269 aaPredicted RBP17.31■□□□□ 0.36
ATG4D-212ENST00000590096 ZNF286AQ9HBT8 521 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 ZNRD1Q9P1U0 126 aa17.31■□□□□ 0.36
ATG4D-212ENST00000590096 A0A087X0M5 115 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 A0A1B0GX30 115 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 C12orf77C9JDV5 145 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 C15orf65H3BRN8 121 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 CLDN34H7C241 214 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 RCC1P18754 421 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-212ENST00000590096 RPS19P39019 145 aaKnown RBP17.3■□□□□ 0.36
ATG4D-212ENST00000590096 PRRX1P54821 245 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 VBP1P61758 197 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 NCS1P62166 190 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 KRTAP24-1Q3LI83 254 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 MINOS1Q5TGZ0 78 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 GPR107Q5VW38 600 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 LHFPL4Q7Z7J7 247 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 PRR18Q8N4B5 295 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 TMEM86BQ8N661 226 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 BEND2Q8NDZ0 799 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 UBALD1Q8TB05 177 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 NDNFQ8TB73 568 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 C17orf50Q8WW18 174 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 ATG5Q9H1Y0 275 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms