RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CCL1P22362 96 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 CBX5P45973 191 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 OR3A1P47881 315 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 PCP4P48539 62 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 INSL3P51460 131 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 ATP1B3P54709 279 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 CXCR4P61073 352 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 AESQ08117 197 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 HES1Q14469 280 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 RBM39Q14498 530 aaKnown RBP4.17□□□□□ -1.74
VAPA-207ENST00000583879 HNF4GQ14541 408 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 C17orf58Q2M2W7 97 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 RGS21Q2M5E4 152 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 ZNF260Q3ZCT1 412 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 FAM98BQ52LJ0 330 aaKnown RBP4.17□□□□□ -1.74
VAPA-207ENST00000583879 SPIN3Q5JUX0 258 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 UTF1Q5T230 341 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 BCL2L15Q5TBC7 163 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 TMEM236Q5W0B7 351 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 ZNF322Q6U7Q0 402 aaPredicted RBP4.17□□□□□ -1.74
VAPA-207ENST00000583879 C16orf89Q6UX73 402 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 MEPCEQ7L2J0 689 aaKnown RBP4.17□□□□□ -1.74
VAPA-207ENST00000583879 STX12Q86Y82 276 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 DEFB107AQ8IZN7 70 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 FAM58AQ8N1B3 248 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 DRAM1Q8N682 238 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 DNAAF1Q8NEP3 725 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 OR4D6Q8NGJ1 314 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 OR8U1Q8NH10 309 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 OR56B4Q8NH76 319 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 OR9G1Q8NH87 305 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 ENKURQ8TC29 256 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 RPEQ96AT9 228 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 BORCS8Q96FH0 119 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 C9orf16Q9BUW7 83 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 GON7Q9BXV9 100 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 TTTY10Q9BZA0 68 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 SLC5A7Q9GZV3 580 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 ZNF556Q9HAH1 456 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 HMG20AQ9NP66 347 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 PALMDQ9NP74 551 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 PCDHB16Q9NRJ7 776 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 TVP23BQ9NYZ1 205 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 SIRT4Q9Y6E7 314 aaPredicted RBP4.17□□□□□ -1.74
VAPA-207ENST00000583879 TENM2Q9NT68 2774 aa4.17□□□□□ -1.74
VAPA-207ENST00000583879 KBTBD11-OT1A0A1B0GTJ5 212 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 A0A1W2PPI3 338 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ODAMA1E959 279 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 C5orf51A6NDU8 294 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 CCDC182A6NF36 153 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ZNF729A6NN14 1252 aaPredicted RBP4.16□□□□□ -1.74
VAPA-207ENST00000583879 E9PI62 339 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 J3QR06 171 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 AP4M1O00189 453 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 SIRPB1O00241 398 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 SYT7O43581 403 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ATP6V1G1O75348 118 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 GATBO75879 557 aaKnown RBP4.16□□□□□ -1.74
VAPA-207ENST00000583879 TNFRSF6BO95407 300 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 DIRAS3O95661 229 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 CST1P01037 141 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 IGKV1D-33P01593 117 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 IGKV1-33P01594 117 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 CSN2P05814 226 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ELANEP08246 267 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 RAP2AP10114 183 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 PRKACAP17612 351 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 BCL3P20749 454 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ATP6V1B2P21281 511 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 PRKACGP22612 351 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 NFYBP25208 207 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 PTGFRP43088 359 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 HSPA13P48723 471 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 MTNR1BP49286 362 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 RBP2P50120 134 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 RAB7AP51149 207 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 SLURP1P55000 103 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 MTCP1P56278 107 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 TSPAN5P62079 268 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 POLR2GP62487 172 aaKnown RBP eCLIP4.16□□□□□ -1.74
VAPA-207ENST00000583879 MS4A2Q01362 244 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 PDZK1IP1Q13113 114 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 FOXE3Q13461 319 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 GPR50Q13585 617 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 EBI3Q14213 229 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 DIAPH2-AS1Q14236 149 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ODF4Q2M2E3 257 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 DEFB136Q30KP8 78 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 IGSF11Q5DX21 431 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 CXorf66Q5JRM2 361 aaPredicted RBP4.16□□□□□ -1.74
VAPA-207ENST00000583879 PLEKHG7Q6ZR37 379 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 TMEM179BQ7Z7N9 219 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 DHFR2Q86XF0 187 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 CCDC54Q8NEL0 328 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 OR11H1Q8NG94 326 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 HAVCR2Q8TDQ0 301 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 TOMM40LQ969M1 308 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 C10orf35Q96D05 121 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 COQ2Q96H96 371 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 CNN2Q99439 309 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms