RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 EXO5Q9H790 373 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 COQ10BQ9H8M1 238 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 MYOZ1Q9NP98 299 aaPredicted RBP1.64□□□□□ -2.15
COPS3-217ENST00000583160 ISYNA1Q9NPH2 558 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 UBQLN4Q9NRR5 601 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 FARSBQ9NSD9 589 aaKnown RBP1.64□□□□□ -2.15
COPS3-217ENST00000583160 CBLN4Q9NTU7 201 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 LAMP5Q9UJQ1 280 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 MCTS1Q9ULC4 181 aaKnown RBP1.64□□□□□ -2.15
COPS3-217ENST00000583160 PSG8Q9UQ74 426 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 SNX24Q9Y343 169 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 UTP11Q9Y3A2 253 aaKnown RBP1.64□□□□□ -2.15
COPS3-217ENST00000583160 TMED5Q9Y3A6 229 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 TIMM10BQ9Y5J6 103 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 GMEB1Q9Y692 573 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 ZNF780BQ9Y6R6 833 aa1.64□□□□□ -2.15
COPS3-217ENST00000583160 DOCK11Q5JSL3 2073 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 IGKV2-24A0A0C4DH68 120 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 DPRXA6NFQ7 191 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 OR5H1A6NKK0 313 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 C16orf90A8MZG2 172 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 SUPT3HB4E1H0 165 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 H0YC42 278 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 UBFD1O14562 309 aaKnown RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 ZNF208O43345 1280 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 EIF4E2O60573 245 aaKnown RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 SCN2BO60939 215 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 SMIM24O75264 130 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 REM1O75628 298 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 PIAS1O75925 651 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 KCNK2O95069 426 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 UTS2O95399 124 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 AK1P00568 194 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 FABP3P05413 133 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 IL3P08700 152 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 SNRPAP09012 282 aaKnown RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 TACSTD2P09758 323 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 P0C880 135 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 GFAPP14136 432 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 RPS4Y1P22090 263 aaKnown RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 LAP3P28838 519 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 IL12BP29460 328 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 PHBP35232 272 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 EVX1P49640 407 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 P2RX1P51575 399 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 PLTPP55058 493 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 ATP5J2P56134 94 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 DMTNQ08495 405 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 SCRN3Q0VDG4 424 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 SELENBP1Q13228 472 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 SKP2Q13309 424 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 DDX39BQ13838 428 aaKnown RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 ZNHIT3Q15649 155 aaPredicted RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 TMEM249Q2WGJ8 235 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 XKR7Q5GH72 579 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 TMPPEQ6ZT21 453 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 TRMT10CQ7L0Y3 403 aaKnown RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 GALNT10Q86SR1 603 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 CTAGE3PQ8IX95 158 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 OR4K17Q8NGC6 315 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 OR8J2Q8NGG1 315 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 OR2V1Q8NHB1 315 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 RAB3IL1Q8TBN0 382 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 SFXN5Q8TD22 340 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 GPR119Q8TDV5 335 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 C10orf105Q8TEF2 133 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 RTN4IP1Q8WWV3 396 aaPredicted RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.63□□□□□ -2.15
COPS3-217ENST00000583160 SLC35B4Q969S0 331 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 PIK3IP1Q96FE7 263 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 JSRP1Q96MG2 331 aaPredicted RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 MS4A4EQ96PG1 132 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 SDF2Q99470 211 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 DHRS9Q9BPW9 319 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 IQCGQ9H095 443 aaKnown RBP1.63□□□□□ -2.15
COPS3-217ENST00000583160 RACGAP1Q9H0H5 632 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 PIGUQ9H490 435 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 ELOVL6Q9H5J4 265 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 POLE3Q9NRF9 147 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 FAIMQ9NVQ4 179 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 C1orf109Q9NX04 203 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 KLHL28Q9NXS3 571 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 MED11Q9P086 117 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 TMEM216Q9P0N5 145 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 DKKL1Q9UK85 242 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 POLDIP2Q9Y2S7 368 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 KCNIP3Q9Y2W7 256 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 HDGFL3Q9Y3E1 203 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 TANC2Q9HCD6 1990 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 WNK2Q9Y3S1 2297 aa1.63□□□□□ -2.15
COPS3-217ENST00000583160 ARPC4-TTLL3A0A0A6YYG9 625 aa1.62□□□□□ -2.15
COPS3-217ENST00000583160 GNG14A0A1W2PPG7 69 aa1.62□□□□□ -2.15
COPS3-217ENST00000583160 VGLL3A8MV65 326 aa1.62□□□□□ -2.15
COPS3-217ENST00000583160 E7EQL1 145 aa1.62□□□□□ -2.15
COPS3-217ENST00000583160 GPR171O14626 319 aa1.62□□□□□ -2.15
COPS3-217ENST00000583160 LSM1O15116 133 aaKnown RBP1.62□□□□□ -2.15
COPS3-217ENST00000583160 SCAMP2O15127 329 aaKnown RBP1.62□□□□□ -2.15
COPS3-217ENST00000583160 MGRN1O60291 552 aa1.62□□□□□ -2.15
COPS3-217ENST00000583160 PLIN3O60664 434 aa1.62□□□□□ -2.15
COPS3-217ENST00000583160 EIF1BO60739 113 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms