RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 IGKV1D-43A0A0B4J1Z2 117 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 LOC102725191A0A1B0GVB3 256 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 A0A1W2PRG6 482 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 PGPA6NDG6 321 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 PSMD11O00231 422 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 PDCD6O75340 191 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 VAPBO95292 243 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 APOA1P02647 267 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 GYPCP04921 128 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 TPM1P09493 284 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 CPMP14384 443 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 BGNP21810 368 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 CCNOP22674 350 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 ELK4P28324 431 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 TSPOP30536 169 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 CASQ1P31415 396 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 SPAM1P38567 509 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 DNASE1L1P49184 302 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 ETV1P50549 477 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 CARD18P57730 90 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 RAB25P57735 213 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 DSTNP60981 165 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 DYNLL1P63167 89 aaKnown RBP0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 ZCWPW2Q504Y3 356 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 FBXO48Q5FWF7 155 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 AADACL4Q5VUY2 407 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 RESP18Q5W5W9 173 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 Q6ZT83 130 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 NIT1Q86X76 327 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 KRTCAP2Q8N6L1 136 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 OR6K2Q8NGY2 324 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 OR6N2Q8NGY6 317 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 OR51Q1Q8NH59 317 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 ZNF563Q8TA94 476 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 DCANP1Q8TF63 244 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 KCTD4Q8WVF5 259 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 CDKL2Q92772 493 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 GLT1D1Q96MS3 346 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 POTEKPQ9BYX7 375 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 SLC19A3Q9BZV2 496 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 SYT4Q9H2B2 425 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 METTL8Q9H825 291 aaKnown RBP0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 IFT46Q9NQC8 304 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 KCNIP2Q9NS61 270 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 TAS2R13Q9NYV9 303 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 VAPAQ9P0L0 249 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 PSORS1C2Q9UIG4 136 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 RBMX2Q9Y388 322 aaKnown RBP0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 TRPM3Q9HCF6 1732 aaPredicted RBP0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 LCTP09848 1927 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 MYO5BQ9ULV0 1848 aa0.71□□□□□ -2.3
SMCHD1-206ENST00000581631 POLR3AO14802 1390 aaPredicted RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 RP1L1Q8IWN7 2480 aaPredicted RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 CACNA1SQ13698 1873 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 IGHV2-26A0A0B4J1V2 119 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 A0A0J9YX75 114 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 LOC100506127A0A0U1RQW1 187 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 MGAT4DA6NG13 374 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 YKT6O15498 198 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 TRAPPC3O43617 180 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 TCF21O43680 179 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 SLC25A20O43772 301 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 ZMPSTE24O75844 475 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 LYNX1P0DP58 116 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 ZNF7P17097 686 aaPredicted RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 DEKP35659 375 aaKnown RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 EMP2P54851 167 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 AQP5P55064 265 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 RAB38P57729 211 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 PRDX1Q06830 199 aaKnown RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 Q3ZCU0 254 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 SSX7Q7RTT5 188 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 C10orf107Q8IVU9 208 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 ACBD4Q8NC06 268 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 LRRC20Q8TCA0 184 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 LGALS14Q8TCE9 139 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 DOK4Q8TEW6 326 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 CCDC124Q96CT7 223 aaKnown RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 ZMYND19Q96E35 227 aaPredicted RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 SIKE1Q9BRV8 207 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 SUCNR1Q9BXA5 334 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 GOLPH3Q9H4A6 298 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 C16orf95Q9H693 158 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 HAUS4Q9H6D7 363 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 METTL17Q9H7H0 456 aaPredicted RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 DNAJC27Q9NZQ0 273 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 CHMP5Q9NZZ3 219 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 NXT1Q9UKK6 140 aaKnown RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 POMPQ9Y244 141 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 CR1P17927 2039 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 CHD2O14647 1828 aaKnown RBP0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 DOCK10Q96BY6 2186 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 CEP170Q5SW79 1584 aa0.7□□□□□ -2.3
SMCHD1-206ENST00000581631 A0A0G2JQZ4 141 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 IGSF23A1L1A6 192 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 VPS37CA5D8V6 355 aaPredicted RBP0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 HSBP1L1C9JCN9 74 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 F8VP50 259 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 hCG_2039718K7EN88 272 aa0.69□□□□□ -2.3
SMCHD1-206ENST00000581631 K7ERQ8 282 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms