RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 OR4D1Q15615 310 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 ZCWPW2Q504Y3 356 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 FAM162BQ5T6X4 162 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 FER1L6-AS1Q8NA97 138 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 PDCD6IPQ8WUM4 868 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 CCDC127Q96BQ5 260 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 CMBLQ96DG6 245 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 EBPLQ9BY08 206 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 FADS3Q9Y5Q0 445 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 ADCY10Q96PN6 1610 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 BIVM-ERCC5R4GMW8 1640 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 DIP2BQ9P265 1576 aa2.15□□□□□ -2.07
SMCHD1-205ENST00000581383 SHROOM2Q13796 1616 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 NLRC5Q86WI3 1866 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 ERICH3Q5RHP9 1530 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 ABCC2Q92887 1545 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 A0A1B0GU33 70 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 SDHAF1A6NFY7 115 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 C8orf87E5RJ46 101 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 FGF16O43320 207 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 BRI3O95415 125 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 GYPCP04921 128 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 GUSBP08236 651 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 SLC35E2BP0CK96 405 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 NQO2P16083 231 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 HSPA13P48723 471 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 RAB2AP61019 212 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 DYNLL1P63167 89 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 SMARCD3Q6STE5 483 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 HS3ST5Q8IZT8 346 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 Q8NAQ8 132 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 OR11G2Q8NGC1 345 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 HIGD2AQ9BW72 106 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 POTEKPQ9BYX7 375 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 KCNIP2Q9NS61 270 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 PHLDA3Q9Y5J5 127 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 ABCC10Q5T3U5 1492 aa2.14□□□□□ -2.07
SMCHD1-205ENST00000581383 KDM6BO15054 1643 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 ARAP3Q8WWN8 1544 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 TRBV24-1A0A075B6N3 115 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 A0A1B0GX12 115 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 TMEM250H0YL14 139 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 SLC31A1O15431 190 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 EEF1E1O43324 174 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 PSCAO43653 123 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 GP1BAP07359 652 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 AKR1C4P17516 323 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 SYT1P21579 422 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 MP68P56378 58 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 MMDQ15546 238 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 USF2Q15853 346 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 ZBTB6Q15916 424 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 SSX7Q7RTT5 188 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 MSRB3Q8IXL7 192 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 KRTCAP2Q8N6L1 136 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 SPPL2BQ8TCT7 592 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 KCTD4Q8WVF5 259 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 DDIT4LQ96D03 193 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 B9D2Q9BPU9 175 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 PRSS27Q9BQR3 290 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 ARL6Q9H0F7 186 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 OR51E2Q9H255 320 aa2.13□□□□□ -2.07
SMCHD1-205ENST00000581383 MAPKBP1O60336 1514 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 A0A1W2PNM2 257 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 CDS2O95674 445 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 OPN1SWP03999 348 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 UGT2B10P36537 528 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 GZMMP51124 257 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 TMED1Q13445 227 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 APOFQ13790 326 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 ANGPT1Q15389 498 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 TMPPEQ6ZT21 453 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 TCF23Q7RTU1 214 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 SELENOHQ8IZQ5 122 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 SYCE1Q8N0S2 351 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 RORBQ92753 470 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 GTF2H4Q92759 462 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 ALX4Q9H161 411 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 METTL17Q9H7H0 456 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 SLC23A2Q9UGH3 650 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 URGCP-MRPS24S4R325 110 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 PLB1Q6P1J6 1458 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 DISP1Q96F81 1524 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 KIAA0586Q9BVV6 1533 aa2.12□□□□□ -2.07
SMCHD1-205ENST00000581383 RAB3GAP2Q9H2M9 1393 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 IQGAP2Q13576 1575 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 PTPRGP23470 1445 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 KIAA0556O60303 1618 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 ERICH4A6NGS2 130 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 EFCAB9A8MZ26 197 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 C3orf84H3BNL1 204 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 GPR171O14626 319 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 SH2D1AO60880 128 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 EPPINO95925 133 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 CTSGP08311 255 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 LIMS3P0CW19 117 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 LIMS4P0CW20 117 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 PSKH1P11801 424 aa2.11□□□□□ -2.07
SMCHD1-205ENST00000581383 ZNF22P17026 224 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms