RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 FAM90A18PA6NE21 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A16PA6NEW6 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A20PA6NIJ5 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A8PA6NJQ4 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A7PA6NKC0 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A22PA8MWA6 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A12PA8MX19 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A5PA8MXJ8 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A23PA8MXZ1 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 LDLRAD4O15165 306 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 TSPAN15O95858 294 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 CSN2P05814 226 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A15PP0C7V4 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A13PP0C7W8 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A14PP0C7W9 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A24PP0C7X0 464 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 ZNF728P0DKX0 622 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 MMP9P14780 707 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 COX7A1P24310 79 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 CHATP28329 748 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 ERP29P30040 261 aaKnown RBP10.86□□□□□ -0.67
CCDC40-205ENST00000571028 MEF2CQ06413 473 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-205ENST00000571028 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-205ENST00000571028 RUSC1-AS1Q66K80 236 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 TCF23Q7RTU1 214 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 Q8N7P7 452 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 OR56B1Q8NGI3 324 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 OR13A1Q8NGR1 328 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 RFESDQ8TAC1 157 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 UBALD1Q8TB05 177 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 SETD6Q8TBK2 473 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 MRGPRDQ8TDS7 321 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 UPRTQ96BW1 309 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 ZNF714Q96N38 554 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 SULT4A1Q9BR01 284 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 DCSTAMPQ9H295 470 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 CHMP1AQ9HD42 196 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-205ENST00000571028 TRAPPC2LQ9UL33 140 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 SOX21Q9Y651 276 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-205ENST00000571028 LINC00312Q9Y6C7 94 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 DOCK11Q5JSL3 2073 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 hCG_1809904A0A1W2PP81 198 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 A0A1W2PPE2 198 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 A0A1W2PR64 198 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 A0A1W2PRV1 198 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 METTL21EPA6NDL7 271 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 M0R1W7 72 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 SPCS2Q15005 226 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 DEFB112Q30KQ8 113 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 MOGAT2Q3SYC2 334 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 PRAMEF5Q5TYX0 476 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 GPR157Q5UAW9 335 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 SLC35E4Q6ICL7 350 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 BRD3OSQ6XYD6 125 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 Q6ZTK2 550 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 REC114Q7Z4M0 266 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 PNKDQ8N490 385 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 DTX3Q8N9I9 347 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 ARHGAP5-AS1Q96IT6 56 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 PECRQ9BY49 303 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 OR6C3Q9NZP0 311 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 RCC2Q9P258 522 aaKnown RBP10.85□□□□□ -0.67
CCDC40-205ENST00000571028 FBLN5Q9UBX5 448 aa10.85□□□□□ -0.67
CCDC40-205ENST00000571028 CENPVL3A0A0U1RRI6 287 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 FAM172BPA6NC97 362 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 H3BUI4 141 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 MMP23AO75900 390 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 MT-ND4P03905 459 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 RAB6AP20340 208 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 KCNJ3P48549 501 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 RORCP51449 518 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 RELBQ01201 579 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 Q6ZPA2 131 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 CROCCP3Q8IVE0 287 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 PRR18Q8N4B5 295 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 OR10R2Q8NGX6 335 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 SLC25A46Q96AG3 418 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 PHF21AQ96BD5 680 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 RAB3CQ96E17 227 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 HDHD3Q9BSH5 251 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-205ENST00000571028 CHIAQ9BZP6 476 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 GAL3ST2Q9H3Q3 398 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 METTL8Q9H825 291 aaKnown RBP10.84□□□□□ -0.67
CCDC40-205ENST00000571028 AK3Q9UIJ7 227 aa10.84□□□□□ -0.67
CCDC40-205ENST00000571028 UBE2J1Q9Y385 318 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-205ENST00000571028 RNASEK-C17orf49H0YIS7 233 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 CSF1P09603 554 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 GNB3P16520 340 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 CDK2P24941 298 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 NFYBP25208 207 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 SSTR5P35346 364 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 TMBIM6P55061 237 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 DLX6P56179 175 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 TMEM50BP56557 158 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 DYNC1I2Q13409 638 aaKnown RBP10.83□□□□□ -0.68
CCDC40-205ENST00000571028 FAM189A2Q15884 450 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 PLAC9Q5JTB6 97 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 BAIAP2L2Q6UXY1 529 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 ZNF497Q6ZNH5 498 aa10.83□□□□□ -0.68
CCDC40-205ENST00000571028 C5orf24Q7Z6I8 188 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms