RNA–Protein interactions for RNA: ENST00000568760.5

DEF8-223, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 4

Gene DEF8, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-223ENST00000568760 ARL11Q969Q4 196 aa12.36□□□□□ -0.43
DEF8-223ENST00000568760 IFT22Q9H7X7 185 aa12.36□□□□□ -0.43
DEF8-223ENST00000568760 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.36□□□□□ -0.43
DEF8-223ENST00000568760 PAK1IP1Q9NWT1 392 aaPredicted RBP12.36□□□□□ -0.43
DEF8-223ENST00000568760 SMPD3Q9NY59 655 aaPredicted RBP12.36□□□□□ -0.43
DEF8-223ENST00000568760 IL36GQ9NZH8 169 aa12.36□□□□□ -0.43
DEF8-223ENST00000568760 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
DEF8-223ENST00000568760 TMEM30CPA0ZSE6 113 aa12.35□□□□□ -0.43
DEF8-223ENST00000568760 K7EIL1 84 aa12.35□□□□□ -0.43
DEF8-223ENST00000568760 FGF16O43320 207 aa12.35□□□□□ -0.43
DEF8-223ENST00000568760 ZNF780AO75290 641 aaPredicted RBP12.35□□□□□ -0.43
DEF8-223ENST00000568760 NHLRC3Q5JS37 347 aa12.35□□□□□ -0.43
DEF8-223ENST00000568760 UBALD1Q8TB05 177 aa12.35□□□□□ -0.43
DEF8-223ENST00000568760 NEK7Q8TDX7 302 aa12.35□□□□□ -0.43
DEF8-223ENST00000568760 GHSRQ92847 366 aa12.35□□□□□ -0.43
DEF8-223ENST00000568760 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 IGHV1-3A0A0C4DH29 117 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 IRGMA1A4Y4 181 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 LINC01548A6NM66 108 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 C15orf65H3BRN8 121 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 CCRL2O00421 344 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 SDCBPO00560 298 aaPredicted RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 HSD17B6O14756 317 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 MT-ND4P03905 459 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 GTF2F2P13984 249 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 MYL12AP19105 171 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 REG1BP48304 166 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 KRTAP10-11P60412 298 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 RPL23AP62750 156 aaKnown RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 ZNF816Q0VGE8 651 aaPredicted RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 RIPK1Q13546 671 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 EBI3Q14213 229 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 SLC22A6Q4U2R8 563 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 SLC35E3Q7Z769 313 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 LINC00596Q86U02 117 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 MRPL41Q8IXM3 137 aaKnown RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 LINC00482Q8N8I6 264 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 OR51D1Q8NGF3 324 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 OR13C5Q8NGS8 318 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 SMIM19Q96E16 107 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 RDH12Q96NR8 316 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 ZNF184Q99676 751 aaPredicted RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 ZFP57Q9NU63 452 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 CHCHD3Q9NX63 227 aaKnown RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 CLEC2DQ9UHP7 191 aa12.34□□□□□ -0.43
DEF8-223ENST00000568760 DIMT1Q9UNQ2 313 aaKnown RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 EXOSC1Q9Y3B2 195 aaKnown RBP12.34□□□□□ -0.43
DEF8-223ENST00000568760 TENM3Q9P273 2699 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 IGHV3-43A0A0B4J1X8 118 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 A0A1W2PP11 408 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 ORC5O43913 435 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 GPX5O75715 221 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 LALBAP00709 142 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 IGHG2P01859 326 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 IGHV3-43DP0DP04 118 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 IGFBP3P17936 291 aaPredicted RBP12.33□□□□□ -0.44
DEF8-223ENST00000568760 HOXD3P31249 432 aaPredicted RBP12.33□□□□□ -0.44
DEF8-223ENST00000568760 THBS3P49746 956 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 SLC35B1P78383 322 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 GPR176Q14439 515 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 FAM53AQ6NSI3 398 aaPredicted RBP12.33□□□□□ -0.44
DEF8-223ENST00000568760 C18orf65Q6ZTR6 163 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 FOXRED2Q8IWF2 684 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 STX19Q8N4C7 294 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 LINC00311Q8N616 119 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 TMEM80Q96HE8 168 aa12.33□□□□□ -0.44
DEF8-223ENST00000568760 TRBV5-5A0A0J9YX44 114 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 A0A1W2PPK0 400 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 WI2-2373I1.2A0A1W2PRP0 233 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 NUDT19A8MXV4 375 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 MCRIP1C9JLW8 97 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 ANKRD65E5RJM6 399 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 AIPO00170 330 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 MYCNOSP40205 109 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 MED21Q13503 144 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 Q499Y3 187 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 DMKNQ6E0U4 476 aaPredicted RBP12.32□□□□□ -0.44
DEF8-223ENST00000568760 ETV3LQ6ZN32 361 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 ZNF497Q6ZNH5 498 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 C8orf86Q6ZUL3 223 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 OR2W3Q7Z3T1 314 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 STPG2Q8N412 459 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 COMMD1Q8N668 190 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 ZFP41Q8N8Y5 198 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 OR2T10Q8NGZ9 312 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 CYGBQ8WWM9 190 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 GFOD1Q9NXC2 390 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 CKLFQ9UBR5 152 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
DEF8-223ENST00000568760 IL3RAP26951 378 aa12.31□□□□□ -0.44
DEF8-223ENST00000568760 CD1BP29016 333 aa12.31□□□□□ -0.44
DEF8-223ENST00000568760 RPS11P62280 158 aaKnown RBP eCLIP12.31□□□□□ -0.44
DEF8-223ENST00000568760 LRRC36Q1X8D7 754 aa12.31□□□□□ -0.44
DEF8-223ENST00000568760 YIF1BQ5BJH7 314 aa12.31□□□□□ -0.44
DEF8-223ENST00000568760 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
DEF8-223ENST00000568760 TTC23Q5W5X9 447 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms