RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 RCHY1Q96PM5 261 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 NR1H4Q96RI1 486 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 S1PR3Q99500 378 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 RIBC2Q9H4K1 309 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 IFT22Q9H7X7 185 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 RAB9BQ9NP90 201 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 SNTNA6NMZ2 147 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 J3QRE1 110 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 FCGR1AP12314 374 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 RUNX1Q01196 453 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 MRPL28Q13084 256 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 SLC25A30Q5SVS4 291 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 MEDAGQ5VYS4 303 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 ACBD7Q8N6N7 88 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 TMEM104Q8NE00 496 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 PLPPR1Q8TBJ4 325 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 MYOZ3Q8TDC0 251 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 RTN4IP1Q8WWV3 396 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 PELI1Q96FA3 418 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 PLSCR3Q9NRY6 295 aa12.3□□□□□ -0.44
HERPUD1-215ENST00000568676 IGHV3-72A0A0B4J1Y9 119 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 TMEM30CPA0ZSE6 113 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 TMEM212A6NML5 194 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 ORC5O43913 435 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 LY86O95711 162 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 LYL1P12980 280 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 REG1BP48304 166 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 RSU1Q15404 277 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 TMEM30BQ3MIR4 351 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 NHLRC3Q5JS37 347 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 TMEM65Q6PI78 240 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 LINC00596Q86U02 117 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 ST6GALNAC6Q969X2 333 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 GPER1Q99527 375 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 DPCDQ9BVM2 203 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 ZMAT4Q9H898 229 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 PALMDQ9NP74 551 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 IMPAD1Q9NX62 359 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 DHDHQ9UQ10 334 aa12.29□□□□□ -0.44
HERPUD1-215ENST00000568676 A0A1W2PPE3 182 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 J3QLW9 94 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 SDCBPO00560 298 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 ZNF19P17023 458 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 RAB3AP20336 220 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 ZNF137PP52743 207 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 ASCL4Q6XD76 172 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 SYS1Q8N2H4 156 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 SUMF2Q8NBJ7 301 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 TNFAIP8L1Q8WVP5 186 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 RNFT2Q96EX2 444 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 C4orf36Q96KX1 117 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 KCTD7Q96MP8 289 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 GFOD1Q9NXC2 390 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 AP4S1Q9Y587 144 aa12.28□□□□□ -0.44
HERPUD1-215ENST00000568676 I3L521 148 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 POLR2IP36954 125 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 ZSCAN26Q16670 478 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 PIGYQ3MUY2 71 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 ZNF529Q6P280 563 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 SBSPONQ8IVN8 264 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 OR1N2Q8NGR9 330 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 OR5AK2Q8NH90 309 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 HSPB9Q9BQS6 159 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 JAM3Q9BX67 310 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 PAK1IP1Q9NWT1 392 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 IL36GQ9NZH8 169 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 ZNF107Q9UII5 783 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 EXOGQ9Y2C4 368 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-215ENST00000568676 LCE6AA0A183 80 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 GABRPO00591 440 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 OR7C1O76099 320 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 RASSF2P50749 326 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 SNRPGP62308 76 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 GALEQ14376 348 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 MPV17LQ2QL34 196 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 STEAP3Q658P3 488 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 SLC25A48Q6ZT89 311 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 ZNF491Q8N8L2 437 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 TSEN15Q8WW01 171 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 SLC7A6OSQ96CW6 309 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 FAM192AQ9GZU8 254 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 OR51J1Q9H342 316 aa12.26□□□□□ -0.45
HERPUD1-215ENST00000568676 OVOL1O14753 267 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 ZNF780AO75290 641 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 ATP5HO75947 161 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 HTR3BO95264 441 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 CSTBP04080 98 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 CD2P06729 351 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 RBM11P57052 281 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 SATL1Q86VE3 508 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 STX19Q8N4C7 294 aa12.25□□□□□ -0.45
HERPUD1-215ENST00000568676 CENPNQ96H22 339 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms