RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 UPK3AO75631 287 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 CCL2P13500 99 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 AGAP20933 346 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 OR1D5P58170 312 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 OR1L4Q8NGR5 311 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 OR2T6Q8NHC8 308 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 ST8SIA1Q92185 356 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 THAP10Q9P2Z0 257 aaPredicted RBP11.68□□□□□ -0.54
UBFD1-207ENST00000567212 OTOFQ9HC10 1997 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 APCSP02743 223 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 DEFA4P12838 97 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 CEACAM16Q2WEN9 425 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 LYSMD4Q5XG99 296 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 NOXO1Q8NFA2 376 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 SHDQ96IW2 340 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 IMMP2LQ96T52 175 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 S1PR3Q99500 378 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 ABHD14AQ9BUJ0 271 aa11.68□□□□□ -0.54
UBFD1-207ENST00000567212 MRPL18Q9H0U6 180 aaKnown RBP11.68□□□□□ -0.54
UBFD1-207ENST00000567212 CACNA1BQ00975 2339 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 NOTCH3Q9UM47 2321 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 H0YIG0 161 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 PLPP3O14495 311 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 SAPCD1Q5SSQ6 148 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 BIVMQ86UB2 503 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 SLC25A43Q8WUT9 341 aaPredicted RBP11.67□□□□□ -0.54
UBFD1-207ENST00000567212 GALMQ96C23 342 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 MAP1LC3CQ9BXW4 147 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 BARX1Q9HBU1 254 aaPredicted RBP11.67□□□□□ -0.54
UBFD1-207ENST00000567212 MPDZO75970 2070 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 A0A087WV48 116 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 NDUFA2O43678 99 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 NMUP48645 174 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 ADPRHP54922 357 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 RIPPLY3P57055 190 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 LDLRAD2Q5SZI1 272 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 GTF3AQ92664 365 aaKnown RBP11.67□□□□□ -0.54
UBFD1-207ENST00000567212 COMMD5Q9GZQ3 224 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.67□□□□□ -0.54
UBFD1-207ENST00000567212 HELTA6NFD8 242 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 UCP3P55916 312 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
UBFD1-207ENST00000567212 LY6G6FQ5SQ64 297 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 CHST5Q9GZS9 411 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 TUBD1Q9UJT1 453 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 KIAA1217Q5T5P2 1943 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 TRIP12Q14669 1992 aaPredicted RBP11.67□□□□□ -0.54
UBFD1-207ENST00000567212 PPP1CAP62136 330 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 HIST1H2BLQ99880 126 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 RAB9BQ9NP90 201 aa11.67□□□□□ -0.54
UBFD1-207ENST00000567212 CTXND1A0A1B0GTU2 59 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 TRDCB7Z8K6 153 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 H3BVH4 76 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
UBFD1-207ENST00000567212 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
UBFD1-207ENST00000567212 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
UBFD1-207ENST00000567212 RHOBP62745 196 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 KMT5CQ86Y97 462 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 D2HGDHQ8N465 521 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 RNF133Q8WVZ7 376 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 CD38P28907 300 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 CISD2Q8N5K1 135 aaKnown RBP11.66□□□□□ -0.54
UBFD1-207ENST00000567212 PSG2P11465 335 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 CEACAM1P13688 526 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 TNFSF4P23510 183 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 SSR4P51571 173 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 SHHQ15465 462 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 ZNF718Q3SXZ3 478 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 SCCPDHQ8NBX0 429 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 OR4X1Q8NH49 305 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 HSD17B10Q99714 261 aaKnown RBP11.66□□□□□ -0.54
UBFD1-207ENST00000567212 PSG11Q9UQ72 335 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 STARD10Q9Y365 291 aa11.66□□□□□ -0.54
UBFD1-207ENST00000567212 TRBV5-5A0A0J9YX44 114 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 VAMP5O95183 116 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 CA2P00918 260 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 CLEC3BP05452 202 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 RPS4Y1P22090 263 aaKnown RBP11.65□□□□□ -0.54
UBFD1-207ENST00000567212 EIF3IQ13347 325 aaKnown RBP11.65□□□□□ -0.54
UBFD1-207ENST00000567212 H1FXQ92522 213 aaKnown RBP11.65□□□□□ -0.54
UBFD1-207ENST00000567212 CLN8Q9UBY8 286 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 TBX21Q9UL17 535 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 PITX3O75364 302 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 FOLR3P41439 243 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 FXYD3Q14802 87 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 OR1C1Q15619 314 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 VAX1Q5SQQ9 334 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 ATG4DQ86TL0 474 aaPredicted RBP11.65□□□□□ -0.54
UBFD1-207ENST00000567212 WDFY1Q8IWB7 410 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 SERGEFQ9UGK8 458 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 IL19Q9UHD0 177 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 INTS1Q8N201 2190 aaKnown RBP11.65□□□□□ -0.54
UBFD1-207ENST00000567212 COL5A3P25940 1745 aaPredicted RBP11.65□□□□□ -0.54
UBFD1-207ENST00000567212 DNAH12Q6ZR08 3092 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 CYR61O00622 381 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 TNFSF11O14788 317 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 SRIP30626 198 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 GNB1P62873 340 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 UNQ9370/PRO34162Q6UXP9 181 aa11.65□□□□□ -0.54
UBFD1-207ENST00000567212 C19orf35Q6ZS72 473 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms