RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 NCBP2LA6PVI3 153 aaKnown RBP9.45□□□□□ -0.9
UBR1-206ENST00000566493 CCRL2O00421 344 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 HSD17B6O14756 317 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 GAPDHP04406 335 aaKnown RBP9.45□□□□□ -0.9
UBR1-206ENST00000566493 SLC6A1P30531 599 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 ZNF93P35789 620 aaPredicted RBP9.45□□□□□ -0.9
UBR1-206ENST00000566493 KRTAP10-11P60412 298 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 RPL23AP62750 156 aaKnown RBP9.45□□□□□ -0.9
UBR1-206ENST00000566493 DIAPH2-AS1Q14236 149 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 VAX1Q5SQQ9 334 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 ATAD3CQ5T2N8 411 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 DDI2Q5TDH0 399 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 LINC00596Q86U02 117 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 MRPL41Q8IXM3 137 aaKnown RBP9.45□□□□□ -0.9
UBR1-206ENST00000566493 COMMD1Q8N668 190 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 ZNF555Q8NEP9 628 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 OR52N1Q8NH53 320 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 NEK7Q8TDX7 302 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 ARL11Q969Q4 196 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 TMEM106AQ96A25 262 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 NOL4LQ96MY1 436 aaPredicted RBP9.45□□□□□ -0.9
UBR1-206ENST00000566493 IFT22Q9H7X7 185 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 FGF20Q9NP95 211 aaPredicted RBP9.45□□□□□ -0.9
UBR1-206ENST00000566493 TMEM138Q9NPI0 162 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 IL36GQ9NZH8 169 aa9.45□□□□□ -0.9
UBR1-206ENST00000566493 ZMAT5Q9UDW3 170 aaKnown RBP9.45□□□□□ -0.9
UBR1-206ENST00000566493 WI2-2373I1.2A0A1W2PRP0 233 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 IRGMA1A4Y4 181 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 SDCBPO00560 298 aaPredicted RBP9.44□□□□□ -0.9
UBR1-206ENST00000566493 GEMIN2O14893 280 aaKnown RBP9.44□□□□□ -0.9
UBR1-206ENST00000566493 ZNF780AO75290 641 aaPredicted RBP9.44□□□□□ -0.9
UBR1-206ENST00000566493 IGHG2P01859 326 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 LIMS3P0CW19 117 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 LIMS4P0CW20 117 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 SERPINA2P20848 420 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 IL3RAP26951 378 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 BDKRB2P30411 391 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 HOXD3P31249 432 aaPredicted RBP9.44□□□□□ -0.9
UBR1-206ENST00000566493 MYCNOSP40205 109 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 THBS3P49746 956 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 RBM11P57052 281 aaKnown RBP9.44□□□□□ -0.9
UBR1-206ENST00000566493 ZNF816Q0VGE8 651 aaPredicted RBP9.44□□□□□ -0.9
UBR1-206ENST00000566493 MPV17LQ2QL34 196 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 NHLRC3Q5JS37 347 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 UNQ9370/PRO34162Q6UXP9 181 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 OR2W3Q7Z3T1 314 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 STX19Q8N4C7 294 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 OR52M1Q8NGK5 317 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 OR2T10Q8NGZ9 312 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 CCDC107Q8WV48 283 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 RGP1Q92546 391 aaPredicted RBP9.44□□□□□ -0.9
UBR1-206ENST00000566493 SLC29A1Q99808 456 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 GON7Q9BXV9 100 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 RAB9BQ9NP90 201 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 CKLFQ9UBR5 152 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 LINC00527Q9UJ94 153 aa9.44□□□□□ -0.9
UBR1-206ENST00000566493 IGHV1-3A0A0C4DH29 117 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 AP4M1O00189 453 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 GTF2F2P13984 249 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 MYL12AP19105 171 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 DCKP27707 260 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 REG1BP48304 166 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 ETV1P50549 477 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 EGFEM1PQ0D2K5 195 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 MED21Q13503 144 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 RIPK1Q13546 671 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 DCTN2Q13561 401 aaKnown RBP9.43□□□□□ -0.9
UBR1-206ENST00000566493 GPR176Q14439 515 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 SLC22A6Q4U2R8 563 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 ETV3LQ6ZN32 361 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 STPG2Q8N412 459 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 APH1BQ8WW43 257 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 EAF1Q96JC9 268 aaPredicted RBP9.43□□□□□ -0.9
UBR1-206ENST00000566493 S100A14Q9HCY8 104 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.43□□□□□ -0.9
UBR1-206ENST00000566493 CHCHD3Q9NX63 227 aaKnown RBP9.43□□□□□ -0.9
UBR1-206ENST00000566493 BABAM2Q9NXR7 383 aa9.43□□□□□ -0.9
UBR1-206ENST00000566493 IGHV3-72A0A0B4J1Y9 119 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 MCRIP1C9JLW8 97 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 AIPO00170 330 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 ORC5O43913 435 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 BAG2O95816 211 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 GP2P55259 537 aaKnown RBP9.42□□□□□ -0.9
UBR1-206ENST00000566493 CD69Q07108 199 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 EBI3Q14213 229 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 SMN1Q16637 294 aaKnown RBP9.42□□□□□ -0.9
UBR1-206ENST00000566493 OR2G6Q5TZ20 316 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 XAF1Q6GPH4 301 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 TEX38Q6PEX7 206 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 TGIF2LXQ8IUE1 241 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 ZNF695Q8IW36 515 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 IZUMO1Q8IYV9 350 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 PQLC1Q8N2U9 271 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 LINC00311Q8N616 119 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 C8orf31Q8N9H6 132 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 ZNF184Q99676 751 aaPredicted RBP9.42□□□□□ -0.9
UBR1-206ENST00000566493 RASL11BQ9BPW5 248 aa9.42□□□□□ -0.9
UBR1-206ENST00000566493 SPACA1Q9HBV2 294 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms