RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ST3GAL4Q11206 333 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 HES1Q14469 280 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 SLC22A6Q4U2R8 563 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 ATAD3CQ5T2N8 411 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 ZNF485Q8NCK3 441 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 OR52M1Q8NGK5 317 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 SGCDQ92629 289 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 GGHQ92820 318 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 MYDGFQ969H8 173 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 ORAI1Q96D31 301 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 PGLYRP3Q96LB9 341 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 SPACA1Q9HBV2 294 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 NECAP2Q9NVZ3 263 aa16.04■□□□□ 0.16
CLN6-207ENST00000566347 TMEM11P17152 192 aa16.03■□□□□ 0.16
CLN6-207ENST00000566347 RPS11P62280 158 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLN6-207ENST00000566347 STX19Q8N4C7 294 aa16.03■□□□□ 0.16
CLN6-207ENST00000566347 ZFP41Q8N8Y5 198 aa16.03■□□□□ 0.16
CLN6-207ENST00000566347 NEK7Q8TDX7 302 aa16.03■□□□□ 0.16
CLN6-207ENST00000566347 MRPS24Q96EL2 167 aaKnown RBP16.03■□□□□ 0.16
CLN6-207ENST00000566347 CNOT2Q9NZN8 540 aaKnown RBP16.03■□□□□ 0.16
CLN6-207ENST00000566347 TRAV8-7A0A075B6U6 113 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 TRBV5-7A0A0A0MS05 114 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 HSD17B6O14756 317 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 FGF16O43320 207 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 ORC5O43913 435 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 PF4P02776 101 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 PRB2P02812 416 aaPredicted RBP16.02■□□□□ 0.16
CLN6-207ENST00000566347 ZNF816Q0VGE8 651 aaPredicted RBP16.02■□□□□ 0.16
CLN6-207ENST00000566347 DIAPH2-AS1Q14236 149 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 ZNF497Q6ZNH5 498 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 CDH26Q8IXH8 852 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 C8orf31Q8N9H6 132 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 ARL11Q969Q4 196 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 PHF21AQ96BD5 680 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 OR14A2Q96R54 314 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 RAB9BQ9NP90 201 aa16.02■□□□□ 0.16
CLN6-207ENST00000566347 A0A1W2PP11 408 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 PSMB11A5LHX3 300 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 MAGEA13PA6NCF6 341 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 C15orf65H3BRN8 121 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 CCRL2O00421 344 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 SDCBPO00560 298 aaPredicted RBP16.01■□□□□ 0.15
CLN6-207ENST00000566347 PIN1P1O15428 100 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 IGKV1D-33P01593 117 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 IGKV1-33P01594 117 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 GAPDHP04406 335 aaKnown RBP16.01■□□□□ 0.15
CLN6-207ENST00000566347 RCN1Q15293 331 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 KHDC1LQ5JSQ8 128 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 Q6ZPA2 131 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 C8orf59Q8N0T1 100 aaPredicted RBP16.01■□□□□ 0.15
CLN6-207ENST00000566347 JAGN1Q8N5M9 183 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 LINC00311Q8N616 119 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 C5orf56Q8N8D9 126 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 THRSPQ92748 146 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 MUL1Q969V5 352 aa16.01■□□□□ 0.15
CLN6-207ENST00000566347 RCC2Q9P258 522 aaKnown RBP16.01■□□□□ 0.15
CLN6-207ENST00000566347 MRPS28Q9Y2Q9 187 aaKnown RBP16.01■□□□□ 0.15
CLN6-207ENST00000566347 A0A1W2PPE3 182 aa16■□□□□ 0.15
CLN6-207ENST00000566347 MCRIP1C9JLW8 97 aa16■□□□□ 0.15
CLN6-207ENST00000566347 AIPO00170 330 aa16■□□□□ 0.15
CLN6-207ENST00000566347 MYL12BO14950 172 aa16■□□□□ 0.15
CLN6-207ENST00000566347 MT-ND4P03905 459 aa16■□□□□ 0.15
CLN6-207ENST00000566347 CD1AP06126 327 aa16■□□□□ 0.15
CLN6-207ENST00000566347 IL3RAP26951 378 aa16■□□□□ 0.15
CLN6-207ENST00000566347 CAPGP40121 348 aa16■□□□□ 0.15
CLN6-207ENST00000566347 SLC35A2P78381 396 aa16■□□□□ 0.15
CLN6-207ENST00000566347 Q3ZCU0 254 aa16■□□□□ 0.15
CLN6-207ENST00000566347 C10orf99Q6UWK7 81 aa16■□□□□ 0.15
CLN6-207ENST00000566347 GLIPR1L1Q6UWM5 242 aa16■□□□□ 0.15
CLN6-207ENST00000566347 CHPT1Q8WUD6 406 aa16■□□□□ 0.15
CLN6-207ENST00000566347 CCDC107Q8WV48 283 aa16■□□□□ 0.15
CLN6-207ENST00000566347 GFOD1Q9NXC2 390 aa16■□□□□ 0.15
CLN6-207ENST00000566347 IGHV1-3A0A0C4DH29 117 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 IGLL1P15814 213 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 WNT4P56705 351 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 DOC2BQ14184 412 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 EBI3Q14213 229 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 HNF4GQ14541 408 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 TMEM30BQ3MIR4 351 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 AWAT2Q6E213 333 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 MOB3BQ86TA1 216 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 MRAPQ8TCY5 172 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 DERL3Q96Q80 235 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 PLCXD1Q9NUJ7 323 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 PSORS1C1Q9UIG5 152 aa15.99■□□□□ 0.15
CLN6-207ENST00000566347 PNMA8CA0A1B0GUJ8 204 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 A0A1W2PPK0 400 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 FAM90A10PA6NDY2 464 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 FAM90A7PA6NKC0 464 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 FAM90A23PA8MXZ1 464 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 SPINT2O43291 252 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 DUS4LO95620 317 aaKnown RBP15.98■□□□□ 0.15
CLN6-207ENST00000566347 MAS1P04201 325 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 GNAO1P09471 354 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 CELP19835 753 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 MAPK3P27361 379 aaPredicted RBP15.98■□□□□ 0.15
CLN6-207ENST00000566347 LOXL3P58215 753 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 C6orf183Q5T699 404 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 FOXB2Q5VYV0 432 aa15.98■□□□□ 0.15
CLN6-207ENST00000566347 RAB12Q6IQ22 244 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms