RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 SNRNP25Q9BV90 132 aaKnown RBP2.98□□□□□ -1.93
CDH1-207ENST00000564745 SLC25A2Q9BXI2 301 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 SLC17A9Q9BYT1 436 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 ACTR3CQ9C0K3 210 aaPredicted RBP2.98□□□□□ -1.93
CDH1-207ENST00000564745 LINC00597Q9H2U6 94 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 NCOR1P1Q9H4R4 102 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 REEP1Q9H902 201 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 POPDC3Q9HBV1 291 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 ISYNA1Q9NPH2 558 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 LHX9Q9NQ69 397 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 C1orf109Q9NX04 203 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 MS4A12Q9NXJ0 267 aa2.98□□□□□ -1.93
CDH1-207ENST00000564745 PDP1Q9P0J1 537 aaPredicted RBP2.98□□□□□ -1.93
CDH1-207ENST00000564745 METTL1Q9UBP6 276 aaKnown RBP2.98□□□□□ -1.93
CDH1-207ENST00000564745 LSM2Q9Y333 95 aaKnown RBP2.98□□□□□ -1.93
CDH1-207ENST00000564745 DDX60LQ5H9U9 1706 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 RICTORQ6R327 1708 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 IGHV3-74A0A0B4J1X5 117 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 IGHV5-51A0A0C4DH38 117 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 TMEM218A2RU14 115 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 SCAMP2O15127 329 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 CRTAPO75718 401 aaPredicted RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 OR2A4O95047 310 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 TCRBP04435 133 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 CRYBA1P05813 215 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 BCHEP06276 602 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 EIF4EP06730 217 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 LINC00032P0C843 101 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 GABRA1P14867 456 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 MUC1P15941 1255 aaPredicted RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 CXCL2P19875 107 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 GSTM3P21266 225 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 S100A11P31949 105 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 SLC1A2P43004 574 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 RBP2P50120 134 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 RAB9AP51151 201 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 XKP51811 444 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 CDC42P60953 191 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 UBE2MP61081 183 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 SNRPGP62308 76 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 ZNF33AQ06730 810 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 C1DQ13901 141 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 IL18Q14116 193 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 GINS1Q14691 196 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 SMCO1Q147U7 214 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 AADACL4Q5VUY2 407 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 RPL13AP3Q6NVV1 102 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 CD200R1LQ6Q8B3 271 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 ARL9Q6T311 187 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 Q6ZR03 302 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 SLC16A13Q7RTY0 426 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 PID1Q7Z2X4 250 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 FAM122BQ7Z309 247 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 TMEM150AQ86TG1 271 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 ZNF561Q8N587 486 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 CYB561D1Q8N8Q1 229 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 C15orf56Q8N910 161 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 PXT1Q8NFP0 134 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 OR5B17Q8NGF7 314 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 OR10G4Q8NGN3 311 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 OR6K3Q8NGY3 331 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 OR52E5Q8NH55 327 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 OR10A6Q8NH74 314 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 COQ8AQ8NI60 647 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 NTAN1Q96AB6 310 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 EXOSC8Q96B26 276 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 C14orf144Q96I85 54 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 ZBED3Q96IU2 234 aaPredicted RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 OR2A7Q96R45 310 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 OR2A5Q96R48 311 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 PFDN5Q99471 154 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 PKMYT1Q99640 499 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 CMSS1Q9BQ75 279 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 C1QTNF6Q9BXI9 259 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 ABCG5Q9H222 651 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 MRPS30Q9NP92 439 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 EXOSC4Q9NPD3 245 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 CLN6Q9NWW5 311 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 TXNL4BQ9NX01 149 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 AHSPQ9NZD4 102 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 VAPAQ9P0L0 249 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 FBXL3Q9UKT7 428 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 POFUT2Q9Y2G5 429 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 CARHSP1Q9Y2V2 147 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 NHSQ6T4R5 1651 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 RBBP6Q7Z6E9 1792 aaKnown RBP2.97□□□□□ -1.93
CDH1-207ENST00000564745 UBR2Q8IWV8 1755 aa2.97□□□□□ -1.93
CDH1-207ENST00000564745 TANC1Q9C0D5 1861 aa2.96□□□□□ -1.93
CDH1-207ENST00000564745 A0A1B0GV90 55 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 TRDV1A0A1B0GX56 115 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 A0A1W2PNU3 283 aaPredicted RBP2.96□□□□□ -1.94
CDH1-207ENST00000564745 IRGMA1A4Y4 181 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 ARRDC5A6NEK1 342 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 NCBP2LA6PVI3 153 aaKnown RBP2.96□□□□□ -1.94
CDH1-207ENST00000564745 LYRM9A8MSI8 78 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 C1orf196B1AJZ1 125 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 DISC1C4P0D8 188 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 C5orf58C9J3I9 102 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 M0QYV0 167 aa2.96□□□□□ -1.94
CDH1-207ENST00000564745 SSNA1O43805 119 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms