RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 FAM90A23PA8MXZ1 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 LY6LH3BQJ8 138 aa8.78□□□□□ -1
SPG11-216ENST00000559347 J3QR06 171 aa8.78□□□□□ -1
SPG11-216ENST00000559347 M0QZ24 198 aa8.78□□□□□ -1
SPG11-216ENST00000559347 AIPO00170 330 aa8.78□□□□□ -1
SPG11-216ENST00000559347 CRTAPO75718 401 aaPredicted RBP8.78□□□□□ -1
SPG11-216ENST00000559347 ATP6V1G2O95670 118 aa8.78□□□□□ -1
SPG11-216ENST00000559347 UCHL1P09936 223 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A15PP0C7V4 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A13PP0C7W8 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A14PP0C7W9 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM90A24PP0C7X0 464 aa8.78□□□□□ -1
SPG11-216ENST00000559347 GNG10P50151 68 aa8.78□□□□□ -1
SPG11-216ENST00000559347 ARHGDIBP52566 201 aa8.78□□□□□ -1
SPG11-216ENST00000559347 PRRX1P54821 245 aa8.78□□□□□ -1
SPG11-216ENST00000559347 RPS25P62851 125 aaKnown RBP8.78□□□□□ -1
SPG11-216ENST00000559347 MLLT11Q13015 90 aaPredicted RBP8.78□□□□□ -1
SPG11-216ENST00000559347 TPBGQ13641 420 aa8.78□□□□□ -1
SPG11-216ENST00000559347 RBM39Q14498 530 aaKnown RBP8.78□□□□□ -1
SPG11-216ENST00000559347 HABP2Q14520 560 aaPredicted RBP8.78□□□□□ -1
SPG11-216ENST00000559347 LTC4SQ16873 150 aa8.78□□□□□ -1
SPG11-216ENST00000559347 HSD17B12Q53GQ0 312 aa8.78□□□□□ -1
SPG11-216ENST00000559347 RAB12Q6IQ22 244 aa8.78□□□□□ -1
SPG11-216ENST00000559347 GAPTQ8N292 157 aa8.78□□□□□ -1
SPG11-216ENST00000559347 RFESDQ8TAC1 157 aa8.78□□□□□ -1
SPG11-216ENST00000559347 LEAP2Q969E1 77 aa8.78□□□□□ -1
SPG11-216ENST00000559347 FAM46BQ96A09 425 aa8.78□□□□□ -1
SPG11-216ENST00000559347 CYYR1Q96J86 154 aa8.78□□□□□ -1
SPG11-216ENST00000559347 CNBD2Q96M20 576 aa8.78□□□□□ -1
SPG11-216ENST00000559347 SELENOIQ9C0D9 397 aa8.78□□□□□ -1
SPG11-216ENST00000559347 CST11Q9H112 138 aa8.78□□□□□ -1
SPG11-216ENST00000559347 ISYNA1Q9NPH2 558 aa8.78□□□□□ -1
SPG11-216ENST00000559347 SERTAD4Q9NUC0 356 aa8.78□□□□□ -1
SPG11-216ENST00000559347 PSG11Q9UQ72 335 aa8.78□□□□□ -1
SPG11-216ENST00000559347 AMMECR1Q9Y4X0 333 aaPredicted RBP8.78□□□□□ -1
SPG11-216ENST00000559347 OOSP1A8MZH6 123 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 C15orf65H3BRN8 121 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 TSPAN15O95858 294 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 IGHV3-7P01780 117 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 UBBP0CG47 229 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 HSMCR30P0CW71 290 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 CD24P25063 80 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 BRS3P32247 399 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 VHLP40337 213 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 HERPUD1Q15011 391 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 TBCEQ15813 527 aaPredicted RBP8.77□□□□□ -1.01
SPG11-216ENST00000559347 C1orf100Q5SVJ3 147 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 GLT8D1Q68CQ7 371 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 SIGIRRQ6IA17 410 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 CCDC144NLQ6NUI1 221 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 TMEM91Q6ZNR0 172 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 C16orf82Q7Z2V1 217 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 CEACAM19Q7Z692 300 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 DTX3Q8N9I9 347 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 UBALD1Q8TB05 177 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 TOMM40LQ969M1 308 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 PRSS22Q9GZN4 317 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 CCDC90BQ9GZT6 254 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 MMP27Q9H306 513 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 KCNK15Q9H427 330 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 LIN7BQ9HAP6 207 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 ETAA1Q9NY74 926 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 GHRLQ9UBU3 117 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 BLOC1S6Q9UL45 172 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 RAB26Q9ULW5 256 aa8.77□□□□□ -1.01
SPG11-216ENST00000559347 A0A1W2PPI3 338 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 MCRIP1C9JLW8 97 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 ORC5O43913 435 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 PDCD6O75340 191 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 MPIG6BO95866 241 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 MT-ND4P03905 459 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 VSIG8P0DPA2 414 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 CPEP16870 476 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 SRMP19623 302 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 GZMHP20718 246 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 PSMA1P25786 263 aaKnown RBP8.76□□□□□ -1.01
SPG11-216ENST00000559347 MAP2K4P45985 399 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 TRAM1Q15629 374 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 C2orf68Q2NKX9 166 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 TMEM95Q3KNT9 176 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 Q6ZS46 218 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 SLC16A12Q6ZSM3 486 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 Q6ZTK2 550 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 OR52M1Q8NGK5 317 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 WIPF2Q8TF74 440 aaPredicted RBP8.76□□□□□ -1.01
SPG11-216ENST00000559347 CCDC107Q8WV48 283 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 CFHR4Q92496 578 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 ARL11Q969Q4 196 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 TMEM203Q969S6 136 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 RPEQ96AT9 228 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 GFI1Q99684 422 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 SLC25A33Q9BSK2 321 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 PEX16Q9Y5Y5 336 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 NOTCH1P46531 2555 aa8.76□□□□□ -1.01
SPG11-216ENST00000559347 IGHV3-43A0A0B4J1X8 118 aa8.75□□□□□ -1.01
SPG11-216ENST00000559347 A0A1W2PPE3 182 aa8.75□□□□□ -1.01
SPG11-216ENST00000559347 C12orf77C9JDV5 145 aa8.75□□□□□ -1.01
SPG11-216ENST00000559347 SDCBPO00560 298 aaPredicted RBP8.75□□□□□ -1.01
SPG11-216ENST00000559347 HSD17B6O14756 317 aa8.75□□□□□ -1.01
SPG11-216ENST00000559347 SLC22A1O15245 554 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms