RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 SPDEFO95238 335 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 SERPINA3P01011 423 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 IGKV1D-33P01593 117 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 IGKV1-33P01594 117 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 IGHG2P01859 326 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 UBCP0CG48 685 aaKnown RBP7.56□□□□□ -1.2
SPG11-212ENST00000558790 ZNF44P15621 663 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 EPHA2P29317 976 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 GLP1RP43220 463 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 KIR3DL2P43630 455 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 PRRX1P54821 245 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 MTCP1P56278 107 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 SLC35B1P78383 322 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 PDZK1IP1Q13113 114 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 KLHL22Q53GT1 634 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 FAHD1Q6P587 224 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 SLC35E3Q7Z769 313 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 RDH10Q8IZV5 341 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 OR5D18Q8NGL1 313 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 OR9G1Q8NH87 305 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 MUC7Q8TAX7 377 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 TMEM163Q8TC26 289 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 DNAJC9Q8WXX5 260 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 C10orf35Q96D05 121 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 OPALINQ96PE5 141 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 SPACA5Q96QH8 159 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 PRRG3Q9BZD7 231 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 PCDHB16Q9NRJ7 776 aa7.56□□□□□ -1.2
SPG11-212ENST00000558790 AMMECR1Q9Y4X0 333 aaPredicted RBP7.56□□□□□ -1.2
SPG11-212ENST00000558790 TNCP24821 2201 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 KBTBD11-OT1A0A1B0GTJ5 212 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 METTL15A6NJ78 407 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 AQP12BA6NM10 295 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 J3QR06 171 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 HSPB6O14558 160 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 MITFO75030 526 aaPredicted RBP7.55□□□□□ -1.2
SPG11-212ENST00000558790 FKBP6O75344 327 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 KDM4BO94953 1096 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 ATF1P18846 271 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 GNG10P50151 68 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 DAPP51397 102 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 EFNB1P98172 346 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 SCN1BQ07699 218 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 MADCAM1Q13477 382 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 HNF4GQ14541 408 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 C9orf66Q5T8R8 295 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 C12orf73Q69YU5 71 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 Q6P435 159 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 UTS2BQ765I0 119 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 GID4Q8IVV7 300 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 FOXRED2Q8IWF2 684 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 AQP12AQ8IXF9 295 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 COMMD1Q8N668 190 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 CCDC54Q8NEL0 328 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 OR10H4Q8NGA5 316 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 OR5M8Q8NGP6 311 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 OR8U1Q8NH10 309 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 NSL1Q96IY1 281 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 IL4I1Q96RQ9 567 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 DCLRE1BQ9H816 532 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 CALYQ9NYX4 217 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 DKK2Q9UBU2 259 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
SPG11-212ENST00000558790 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 RBMY1BA6NDE4 496 aaKnown RBP7.54□□□□□ -1.2
SPG11-212ENST00000558790 RBMY1EA6NEQ0 496 aaKnown RBP7.54□□□□□ -1.2
SPG11-212ENST00000558790 ZAR1LA6NP61 321 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 SEC14L6B5MCN3 397 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 SULT1C4O75897 302 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 RBMY1DP0C7P1 496 aaKnown RBP7.54□□□□□ -1.2
SPG11-212ENST00000558790 CALB2P22676 271 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 PRKACBP22694 351 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 CHATP28329 748 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 GPR12P47775 334 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 ISL1P61371 349 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 GNGT1P63211 74 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 BNIP1Q12981 228 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 CDK5R1Q15078 307 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 LTC4SQ16873 150 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 TP53I3Q53FA7 332 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 TEX38Q6PEX7 206 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 SPATA24Q86W54 205 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 OR8H3Q8N146 312 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 CHST4Q8NCG5 386 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 Q8NFD4 153 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 OR13A1Q8NGR1 328 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 SPSB1Q96BD6 273 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 NEK6Q9HC98 313 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 KRT84Q9NSB2 600 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 OR6C3Q9NZP0 311 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 GNG8Q9UK08 70 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 PSG11Q9UQ72 335 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 MYRFQ9Y2G1 1151 aa7.54□□□□□ -1.2
SPG11-212ENST00000558790 AP4M1O00189 453 aa7.53□□□□□ -1.2
SPG11-212ENST00000558790 HSD17B6O14756 317 aa7.53□□□□□ -1.2
SPG11-212ENST00000558790 IL1AP01583 271 aa7.53□□□□□ -1.2
SPG11-212ENST00000558790 OR2T7P0C7T2 308 aa7.53□□□□□ -1.2
SPG11-212ENST00000558790 CGB3P0DN86 165 aa7.53□□□□□ -1.2
SPG11-212ENST00000558790 CGB7P0DN87 165 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms