RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 SULT1C2O00338 296 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 CTDSPLO15194 276 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 LPLP06858 475 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 LIPFP07098 398 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 MSMBP08118 114 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 IGHV4-31P0DP07 118 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 CCL3L1P16619 93 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 GZMHP20718 246 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 DTYMKP23919 212 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 CBX5P45973 191 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 PAX2Q02962 417 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 LSAMPQ13449 338 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 ZNF273Q14593 569 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 TMEM249Q2WGJ8 235 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 C11orf91Q3C1V1 193 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 C6orf183Q5T699 404 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 ZNF880Q6PDB4 577 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 TCF23Q7RTU1 214 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 C5orf24Q7Z6I8 188 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 Q8N402 240 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 MFSD4AQ8N468 514 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 PRR18Q8N4B5 295 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 GVQW1Q8N7I0 195 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 LINC01356Q8N9X3 169 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 LY6G5BQ8NDX9 201 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 OR52I2Q8NH67 350 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 GPX8Q8TED1 209 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 CORO2AQ92828 525 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 ZNF714Q96N38 554 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 SCPEP1Q9HB40 452 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 MMP26Q9NRE1 261 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 KCNIP1Q9NZI2 227 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 ONECUT1Q9UBC0 465 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 KLK11Q9UBX7 282 aa7.92□□□□□ -1.14
CUX1-216ENST00000558469 POLR3KQ9Y2Y1 108 aaPredicted RBP7.92□□□□□ -1.14
CUX1-216ENST00000558469 UBE2J1Q9Y385 318 aaPredicted RBP7.92□□□□□ -1.14
CUX1-216ENST00000558469 CELSR1Q9NYQ6 3014 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 IGHV2-70DA0A0C4DH43 119 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 KIR2DS1A0A191URI9 304 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 A0A1W2PPH5 198 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 ZNF729A6NN14 1252 aaPredicted RBP7.91□□□□□ -1.14
CUX1-216ENST00000558469 POM121CA8CG34 1229 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 TRDCB7Z8K6 153 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 ENSAO43768 121 aaKnown RBP7.91□□□□□ -1.14
CUX1-216ENST00000558469 RBBP9O75884 186 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 TGFAP01135 160 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 ZNF728P0DKX0 622 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 SSTR5P35346 364 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 GZMKP49863 264 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 ARF6P62330 175 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 MRPS10P82664 201 aaKnown RBP7.91□□□□□ -1.14
CUX1-216ENST00000558469 C17orf58Q2M2W7 97 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 CR1LQ2VPA4 569 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 CYB5R2Q6BCY4 276 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 TRAT1Q6PIZ9 186 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 MOB1BQ7L9L4 216 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 HOGA1Q86XE5 327 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 RFESDQ8TAC1 157 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 UBALD1Q8TB05 177 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 SMIM4Q8WVI0 70 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 ARL11Q969Q4 196 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 MSI2Q96DH6 328 aaKnown RBP7.91□□□□□ -1.14
CUX1-216ENST00000558469 TSC22D3Q99576 134 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 SRRQ9GZT4 340 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 GAL3ST2Q9H3Q3 398 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 TAF9BQ9HBM6 251 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 ZNF286AQ9HBT8 521 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 MBNL3Q9NUK0 354 aaKnown RBP7.91□□□□□ -1.14
CUX1-216ENST00000558469 HIF1ANQ9NWT6 349 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 TAS2R3Q9NYW6 316 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 MGAT4AQ9UM21 535 aa7.91□□□□□ -1.14
CUX1-216ENST00000558469 IGKV1D-8A0A087WSZ0 117 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 TRAV20A0A0B4J274 112 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 KBTBD11-OT1A0A1B0GTJ5 212 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 C12orf77C9JDV5 145 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 SPINT2O43291 252 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 GSTZ1O43708 216 aaPredicted RBP7.9□□□□□ -1.14
CUX1-216ENST00000558469 LANCL1O43813 399 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 ORC5O43913 435 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 HBZP02008 142 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 INHBBP09529 407 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 SCTP09683 121 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 GSTT2P0CG29 244 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 GSTT2BP0CG30 244 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 CGB3P0DN86 165 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 CGB7P0DN87 165 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 OMGP23515 440 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 DVL1P1P54792 670 aaPredicted RBP7.9□□□□□ -1.14
CUX1-216ENST00000558469 DLX6P56179 175 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 ERVFRD-1P60508 538 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 HLA-DRB3P79483 266 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 ZNF846Q147U1 533 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 SRSF7Q16629 238 aaKnown RBP eCLIP7.9□□□□□ -1.141e-8■■■■■ 28.4
CUX1-216ENST00000558469 LTC4SQ16873 150 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 DCAF12L2Q5VW00 463 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 OR52W1Q6IF63 320 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 BTNL3Q6UXE8 466 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 GLCCI1Q86VQ1 547 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 GDPD1Q8N9F7 314 aa7.9□□□□□ -1.14
CUX1-216ENST00000558469 BEST4Q8NFU0 473 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms