RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SULT1A4P0DMN0 295 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 IGFBP2P18065 325 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 EIF2B2P49770 351 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 C2orf68Q2NKX9 166 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 TAF9BQ9HBM6 251 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 MYOZ1Q9NP98 299 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 MBNL3Q9NUK0 354 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 TMEM106BQ9NUM4 274 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 OR1A1Q9P1Q5 309 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 CHD6Q8TD26 2715 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 LYNX1G3V0Z9 82 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 TMEM178BH3BS89 294 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 LYNX1P0DP58 116 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 ZBTB25P24278 435 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 SLC35E4Q6ICL7 350 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 MRGPRDQ8TDS7 321 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 CASTOR1Q8WTX7 329 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 PPYP01298 95 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 LIN54Q6MZP7 749 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 MOB1BQ7L9L4 216 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 FAM216BQ8N7L0 139 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 OR4A4PQ8NGN8 299 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 PRR13Q9NZ81 148 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 MGAT4CQ9UBM8 478 aa17.03■□□□□ 0.32
SNRPA1-205ENST00000558036 C9orf170A2RU37 121 aa17.02■□□□□ 0.32
SNRPA1-205ENST00000558036 CD8AP01732 235 aa17.02■□□□□ 0.32
SNRPA1-205ENST00000558036 ZNF728P0DKX0 622 aa17.02■□□□□ 0.32
SNRPA1-205ENST00000558036 IL13RA1P78552 427 aa17.02■□□□□ 0.32
SNRPA1-205ENST00000558036 TEX36Q5VZQ5 186 aa17.02■□□□□ 0.32
SNRPA1-205ENST00000558036 LYG2Q86SG7 212 aa17.02■□□□□ 0.32
SNRPA1-205ENST00000558036 MOB3AQ96BX8 217 aa17.02■□□□□ 0.32
SNRPA1-205ENST00000558036 IGHV1-69-2A0A0G2JMI3 117 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 C12orf77C9JDV5 145 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 K7N7A8 449 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 HERV-K104P61576 105 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 FAM53AQ6NSI3 398 aaPredicted RBP17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 FGFRL1Q8N441 504 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 OR13A1Q8NGR1 328 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 SNX22Q96L94 193 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 SCGB3A2Q96PL1 93 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 GAFA1Q96PS6 74 aa17.02■□□□□ 0.31
SNRPA1-205ENST00000558036 LY6HO94772 140 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 SIX6O95475 246 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 MUC1P15941 1255 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 KCNJ3P48549 501 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 EDDM3BP56851 147 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 SUPT4H1P63272 117 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 SURF2Q15527 256 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 TMEM128Q5BJH2 165 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 TMEM185AQ8NFB2 350 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 OR1L1Q8NH94 360 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 OR10J5Q8NHC4 309 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 CHIAQ9BZP6 476 aa17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 C14orf166Q9Y224 244 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-205ENST00000558036 TRBV6-7A0A0A0MS04 114 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 IGKV1D-13A0A0B4J2D9 117 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 TMPRSS2O15393 492 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 IGKV1-13P0DP09 117 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 SSTR5P35346 364 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 SLC9A3R2Q15599 337 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 HMGN3Q15651 99 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 PHLDA2Q53GA4 152 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 MEX3BQ6ZN04 569 aaKnown RBP17■□□□□ 0.31
SNRPA1-205ENST00000558036 ZNF561Q8N587 486 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 WDR89Q96FK6 387 aaPredicted RBP17■□□□□ 0.31
SNRPA1-205ENST00000558036 SDSLQ96GA7 329 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 LAMP3Q9UQV4 416 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 DSCAMO60469 2012 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 KIAA2026Q5HYC2 2103 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 PPIAL4EA0A075B759 164 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 FAM172BPA6NC97 362 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 PPIAL4DF5H284 164 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 MGST3O14880 152 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 CTXN2P0C2S0 81 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 PPIAL4FP0DN26 164 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 C11orf91Q3C1V1 193 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 FAHD2BQ6P2I3 314 aaPredicted RBP17■□□□□ 0.31
SNRPA1-205ENST00000558036 C1orf87Q8N0U7 546 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 C12orf45Q8N5I9 185 aaPredicted RBP17■□□□□ 0.31
SNRPA1-205ENST00000558036 OR2AK2Q8NG84 335 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 SECTM1Q8WVN6 248 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 FAHD2AQ96GK7 314 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 CABLES2Q9BTV7 478 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 PARP12Q9H0J9 701 aaKnown RBP17■□□□□ 0.31
SNRPA1-205ENST00000558036 CBLN4Q9NTU7 201 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 KCNIP1Q9NZI2 227 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 PCDHB10Q9UN67 800 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 PPIAL4AQ9Y536 164 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 TACC2O95359 2948 aa17■□□□□ 0.31
SNRPA1-205ENST00000558036 LGALS8O00214 317 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 GOSR2O14653 212 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 DANCRP0C864 163 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 COL8A2P25067 703 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 TAS2R31P59538 309 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 CLEC18BQ6UXF7 455 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 ZNF788Q6ZQV5 615 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 LDLRAD3Q86YD5 345 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 RFESDQ8TAC1 157 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 UBTD1Q9HAC8 227 aa16.99■□□□□ 0.31
SNRPA1-205ENST00000558036 SEBOXQ9HB31 216 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms