RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 OR10H4Q8NGA5 316 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 TRUB1Q8WWH5 349 aaKnown RBP7.91□□□□□ -1.14
SCFD1-220ENST00000556486 EME1Q96AY2 570 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 OPALINQ96PE5 141 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 TBX5Q99593 518 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 CIB1Q99828 191 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 OSBPL10Q9BXB5 764 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 GPR61Q9BZJ8 451 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 EXOSC4Q9NPD3 245 aaKnown RBP7.91□□□□□ -1.14
SCFD1-220ENST00000556486 PCDHB16Q9NRJ7 776 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 FAM53CQ9NYF3 392 aa7.91□□□□□ -1.14
SCFD1-220ENST00000556486 ZNF729A6NN14 1252 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-220ENST00000556486 CGB3P0DN86 165 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 CGB7P0DN87 165 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 FCGR1AP12314 374 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 FASP25445 335 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 PTGFRP43088 359 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 POU3F4P49335 361 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 TBCEQ15813 527 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-220ENST00000556486 TPTE2P1Q5T6R2 138 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 PRAMEF5Q5TYX0 476 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 Q6P435 159 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 BAIAP2L2Q6UXY1 529 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 TRAPPC6BQ86SZ2 158 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 ZNF329Q86UD4 541 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 RDH10Q8IZV5 341 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 OR51T1Q8NGJ9 327 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 CAPSLQ8WWF8 208 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 STMN2Q93045 179 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 COQ2Q96H96 371 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 ZNF286AQ9HBT8 521 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 OR6C3Q9NZP0 311 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 OAZ3Q9UMX2 235 aa7.9□□□□□ -1.14
SCFD1-220ENST00000556486 LSM4Q9Y4Z0 139 aaKnown RBP7.9□□□□□ -1.14
SCFD1-220ENST00000556486 KBTBD11-OT1A0A1B0GTJ5 212 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 OR4C45A6NMZ5 311 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 H3BSH0 61 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 SIRPB1O00241 398 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 SLC33A1O00400 549 aaPredicted RBP7.89□□□□□ -1.15
SCFD1-220ENST00000556486 SNRNP70P08621 437 aaKnown RBP7.89□□□□□ -1.15
SCFD1-220ENST00000556486 RPSAP08865 295 aaKnown RBP7.89□□□□□ -1.15
SCFD1-220ENST00000556486 FAM106CPP0CH98 169 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 ARL3P36405 182 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 ATP6V1E1P36543 226 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 POLR2IP36954 125 aaKnown RBP7.89□□□□□ -1.15
SCFD1-220ENST00000556486 MNDAP41218 407 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 GLIPR1P48060 266 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 PRRX1P54821 245 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 NANOS3P60323 173 aaKnown RBP7.89□□□□□ -1.15
SCFD1-220ENST00000556486 AESQ08117 197 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 DCTN2Q13561 401 aaKnown RBP7.89□□□□□ -1.15
SCFD1-220ENST00000556486 CDK5R1Q15078 307 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 MLANAQ16655 118 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 C17orf58Q2M2W7 97 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 TP53I3Q53FA7 332 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 ELP2Q6IA86 826 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 UNQ9370/PRO34162Q6UXP9 181 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 NKAIN3Q8N8D7 197 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 Q8NFD4 153 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 OR4D6Q8NGJ1 314 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 OR9G1Q8NH87 305 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 FGGYQ96C11 551 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 RCHY1Q96PM5 261 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 GNG8Q9UK08 70 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 GSTK1Q9Y2Q3 226 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 MOB4Q9Y3A3 225 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 AP4S1Q9Y587 144 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 HSPE1-MOB4S4R3N1 261 aa7.89□□□□□ -1.15
SCFD1-220ENST00000556486 NPIPB11E5RHQ5 1161 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 TOR1AO14656 332 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 FGF16O43320 207 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 CLEC3BP05452 202 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 DBTP11182 482 aaKnown RBP7.88□□□□□ -1.15
SCFD1-220ENST00000556486 ZNF20P17024 532 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 PI3P19957 117 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 THBS3P49746 956 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 ZP1P60852 638 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 KPNB1Q14974 876 aaKnown RBP7.88□□□□□ -1.15
SCFD1-220ENST00000556486 KRBOX4Q5JUW0 171 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 SLC16A12Q6ZSM3 486 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 PARP16Q8N5Y8 322 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 OR51A4Q8NGJ6 313 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 CENPNQ96H22 339 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-220ENST00000556486 NEU1Q99519 415 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 MCRIP2Q9BUT9 160 aaKnown RBP7.88□□□□□ -1.15
SCFD1-220ENST00000556486 NEK6Q9HC98 313 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 ZFP57Q9NU63 452 aa7.88□□□□□ -1.15
SCFD1-220ENST00000556486 AMMECR1Q9Y4X0 333 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-220ENST00000556486 A0A1W2PPI3 338 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 PSMB11A5LHX3 300 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 J3QR06 171 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 TSPAN4O14817 238 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 IL1AP01583 271 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 ZNF44P15621 663 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 KCNJ3P48549 501 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 SNRPGP62308 76 aaKnown RBP7.87□□□□□ -1.15
SCFD1-220ENST00000556486 RPL23AP62750 156 aaKnown RBP7.87□□□□□ -1.15
SCFD1-220ENST00000556486 BNIP1Q12981 228 aa7.87□□□□□ -1.15
SCFD1-220ENST00000556486 KISS1Q15726 138 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms