RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TMPRSS11AQ6ZMR5 421 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 OSR2Q8N2R0 312 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 DRAM1Q8N682 238 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 OR10A7Q8NGE5 316 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 OR4X2Q8NGF9 303 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 OR52N1Q8NH53 320 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 SMIM19Q96E16 107 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 METTL9Q9H1A3 318 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 PCDHB16Q9NRJ7 776 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 CLEC2DQ9UHP7 191 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 ING4Q9UNL4 249 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 DIMT1Q9UNQ2 313 aaKnown RBP8.56□□□□□ -1.04
TDP1-212ENST00000555565 MOB4Q9Y3A3 225 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 HSPE1-MOB4S4R3N1 261 aa8.56□□□□□ -1.04
TDP1-212ENST00000555565 TRBV5-5A0A0J9YX44 114 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 LCE6AA0A183 80 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 A0A1W2PPE3 182 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 MAGEA13PA6NCF6 341 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 GEMIN2O14893 280 aaKnown RBP8.55□□□□□ -1.04
TDP1-212ENST00000555565 OR7C1O76099 320 aaPredicted RBP8.55□□□□□ -1.04
TDP1-212ENST00000555565 CSTBP04080 98 aaKnown RBP8.55□□□□□ -1.04
TDP1-212ENST00000555565 IGFBP3P17936 291 aaPredicted RBP8.55□□□□□ -1.04
TDP1-212ENST00000555565 BDKRB2P30411 391 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 RPS11P62280 158 aaKnown RBP eCLIP8.55□□□□□ -1.04
TDP1-212ENST00000555565 DMKNQ6E0U4 476 aaPredicted RBP8.55□□□□□ -1.04
TDP1-212ENST00000555565 SLC16A12Q6ZSM3 486 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 OR8H3Q8N146 312 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 C5orf56Q8N8D9 126 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 LINC00482Q8N8I6 264 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 ZNF485Q8NCK3 441 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 GHSRQ92847 366 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 ZNF184Q99676 751 aaPredicted RBP8.55□□□□□ -1.04
TDP1-212ENST00000555565 LSM4Q9Y4Z0 139 aaKnown RBP8.55□□□□□ -1.04
TDP1-212ENST00000555565 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
TDP1-212ENST00000555565 TRAV8-7A0A075B6U6 113 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 A0A1W2PP11 408 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 TMEM30CPA0ZSE6 113 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 IRGMA1A4Y4 181 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 PSMB11A5LHX3 300 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 C15orf65H3BRN8 121 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 EBAG9O00559 213 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 GPX5O75715 221 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 PF4P02776 101 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 MYL12AP19105 171 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 GZMHP20718 246 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 SERPINA2P20848 420 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 RAB7AP51149 207 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 RIPK1Q13546 671 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 HES1Q14469 280 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 HNF4GQ14541 408 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 LRRC36Q1X8D7 754 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 SLC22A6Q4U2R8 563 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 FAM53AQ6NSI3 398 aaPredicted RBP8.54□□□□□ -1.04
TDP1-212ENST00000555565 LINC00596Q86U02 117 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 ZNF329Q86UD4 541 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 ZFP41Q8N8Y5 198 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 OR10X1Q8NGY0 326 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 UBALD1Q8TB05 177 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 CYGBQ8WWM9 190 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 PGLYRP3Q96LB9 341 aa8.54□□□□□ -1.04
TDP1-212ENST00000555565 PAK1IP1Q9NWT1 392 aaPredicted RBP8.54□□□□□ -1.04
TDP1-212ENST00000555565 EXOSC1Q9Y3B2 195 aaKnown RBP8.54□□□□□ -1.04
TDP1-212ENST00000555565 HSD17B6O14756 317 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 FGF16O43320 207 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 IGKV1D-33P01593 117 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 IGKV1-33P01594 117 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 MT-ND4P03905 459 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 GTF2F2P13984 249 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 TMEM11P17152 192 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 FSTP19883 344 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 REG1BP48304 166 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 ADARB1P78563 741 aaKnown RBP8.53□□□□□ -1.04
TDP1-212ENST00000555565 ZNF816Q0VGE8 651 aaPredicted RBP8.53□□□□□ -1.04
TDP1-212ENST00000555565 EBI3Q14213 229 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 MPV17LQ2QL34 196 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 Q499Y3 187 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 KHDC1LQ5JSQ8 128 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 ATAD3CQ5T2N8 411 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 TTC23Q5W5X9 447 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 ZNF497Q6ZNH5 498 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 OR52M1Q8NGK5 317 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 CCDC107Q8WV48 283 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 GGHQ92820 318 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 ARL11Q969Q4 196 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 TMEM80Q96HE8 168 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 NOL4LQ96MY1 436 aaPredicted RBP8.53□□□□□ -1.04
TDP1-212ENST00000555565 S100A13Q99584 98 aa8.53□□□□□ -1.04
TDP1-212ENST00000555565 TRBV5-7A0A0A0MS05 114 aa8.52□□□□□ -1.05
TDP1-212ENST00000555565 IGHV3-72A0A0B4J1Y9 119 aa8.52□□□□□ -1.05
TDP1-212ENST00000555565 IGHV1-3A0A0C4DH29 117 aa8.52□□□□□ -1.05
TDP1-212ENST00000555565 A0A1W2PPK0 400 aa8.52□□□□□ -1.05
TDP1-212ENST00000555565 CCRL2O00421 344 aa8.52□□□□□ -1.05
TDP1-212ENST00000555565 SDCBPO00560 298 aaPredicted RBP8.52□□□□□ -1.05
TDP1-212ENST00000555565 ORC5O43913 435 aa8.52□□□□□ -1.05
TDP1-212ENST00000555565 ZNF780AO75290 641 aaPredicted RBP8.52□□□□□ -1.05
TDP1-212ENST00000555565 IGHG2P01859 326 aa8.52□□□□□ -1.05
TDP1-212ENST00000555565 GAPDHP04406 335 aaKnown RBP8.52□□□□□ -1.05
TDP1-212ENST00000555565 ST3GAL4Q11206 333 aa8.52□□□□□ -1.05
TDP1-212ENST00000555565 YIF1BQ5BJH7 314 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms