RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 MGLLQ99685 303 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 CDCA4Q9BXL8 241 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 BARHL1Q9BZE3 327 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 SELENOIQ9C0D9 397 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 DUSP21Q9H596 190 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 HEXA-AS1Q9H8Q6 139 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 PLGRKTQ9HBL7 147 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 VCX3AQ9NNX9 186 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 HMG20AQ9NP66 347 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 C19orf12Q9NSK7 152 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 FKBP14Q9NWM8 211 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 ST3GAL6Q9Y274 331 aa3.8□□□□□ -1.8
ATXN3-231ENST00000554994 AK6Q9Y3D8 172 aaKnown RBP3.8□□□□□ -1.8
ATXN3-231ENST00000554994 MEIKINA0A087WXM9 373 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 TRGV10A0A0A0MS01 117 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 TRBV5-5A0A0J9YX44 114 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 LOC100506127A0A0U1RQW1 187 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 hADV38S2A0JD32 116 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 SMIM30A4D0T7 59 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 DPPA5A6NC42 116 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 FAM172BPA6NC97 362 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 BTBD17A6NE02 478 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 MCRIP1C9JLW8 97 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 TOR1AO14656 332 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 MGST3O14880 152 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 NPFFO15130 113 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 HOXA3O43365 443 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-231ENST00000554994 OR7C1O76099 320 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-231ENST00000554994 MPIG6BO95866 241 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 IGHV3-7P01780 117 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 ARG1P05089 322 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF728P0DKX0 622 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 GTF2F2P13984 249 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 MPZP25189 248 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 PAX6P26367 422 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 GLIPR1P48060 266 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 BMXP51813 675 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 ERVK11-1P61568 191 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 RPS11P62280 158 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATXN3-231ENST00000554994 PAX2Q02962 417 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 EMX1Q04741 257 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-231ENST00000554994 GPR50Q13585 617 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 GPR176Q14439 515 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 RBM39Q14498 530 aaKnown RBP3.79□□□□□ -1.8
ATXN3-231ENST00000554994 IRF3Q14653 427 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 P2RY14Q15391 338 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 TRAM1Q15629 374 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 NEDD8Q15843 81 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 LY6EQ16553 131 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 TAF9Q16594 264 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 TOR2AQ5JU69 321 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 SPIN3Q5JUX0 258 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 HES5Q5TA89 166 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 KRT74Q7RTS7 529 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 OR8H2Q8N162 312 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF565Q8N9K5 539 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 SUMF2Q8NBJ7 301 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF485Q8NCK3 441 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 LY6G5BQ8NDX9 201 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 OR4D6Q8NGJ1 314 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 RFESDQ8TAC1 157 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 UBALD1Q8TB05 177 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 SLC25A28Q96A46 364 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 UPRTQ96BW1 309 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 PGLYRP3Q96LB9 341 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 DERL3Q96Q80 235 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 YTHDF1Q9BYJ9 559 aaKnown RBP3.79□□□□□ -1.8
ATXN3-231ENST00000554994 FAM234AQ9H0X4 552 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 SIRPDQ9H106 197 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 METTL8Q9H825 291 aaKnown RBP3.79□□□□□ -1.8
ATXN3-231ENST00000554994 HES4Q9HCC6 221 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 ACOT13Q9NPJ3 140 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF222Q9UK12 451 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 FOXJ3Q9UPW0 622 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 PEX16Q9Y5Y5 336 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 KPTNQ9Y664 436 aa3.79□□□□□ -1.8
ATXN3-231ENST00000554994 TET2Q6N021 2002 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 A0A075B6Q4 140 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 TRBV5-7A0A0A0MS05 114 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 A0A0U1RQK1 487 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 LCE6AA0A183 80 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 A0A1W2PP11 408 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 RNASEK-C17orf49H0YIS7 233 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 M0R1W7 72 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 SLC33A1O00400 549 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 PDCD5O14737 125 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 GEMIN2O14893 280 aaKnown RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF780AO75290 641 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ARL6IP5O75915 188 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 CD1AP06126 327 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 MGMTP16455 207 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 IGFBP3P17936 291 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 PRTN3P24158 256 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 MYL9P24844 172 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 HTR2CP28335 458 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 GLP1RP43220 463 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 OR3A1P47881 315 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 RAB13P51153 203 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 PRRX1P54821 245 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 CLDN12P56749 244 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms