RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 BEX1Q9HBH7 125 aa4.85□□□□□ -1.63
ATXN3-230ENST00000554673 PIPOXQ9P0Z9 390 aa4.85□□□□□ -1.63
ATXN3-230ENST00000554673 CKLFQ9UBR5 152 aa4.85□□□□□ -1.63
ATXN3-230ENST00000554673 ST3GAL6Q9Y274 331 aa4.85□□□□□ -1.63
ATXN3-230ENST00000554673 ALG5Q9Y673 324 aa4.85□□□□□ -1.63
ATXN3-230ENST00000554673 SPTAN1Q13813 2472 aaKnown RBP4.85□□□□□ -1.63
ATXN3-230ENST00000554673 ASH1LQ9NR48 2969 aaKnown RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 TRAV6A0A075B6T7 132 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 OR5H14A6NHG9 310 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 CEACAM18A8MTB9 384 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 SMLR1H3BR10 107 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 SIRPB1O00241 398 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 SDCBPO00560 298 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 HSPB6O14558 160 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 TIMM8AO60220 97 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 PDCD6O75340 191 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 TPPPO94811 219 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 CYB5R3P00387 301 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 PMP2P02689 132 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 TCRBP04435 133 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 SCTP09683 121 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 GSTT2P0CG29 244 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 GSTT2BP0CG30 244 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 PRKACAP17612 351 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 ANXA7P20073 488 aaKnown RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 COL8A2P25067 703 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 LMO1P25800 156 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 PRSS3P35030 304 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 HRH1P35367 487 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 CFHR2P36980 270 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 KCNJ3P48549 501 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 TIRAPP58753 221 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 BRWD1-AS2P59051 145 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 LINC00205P59089 165 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 SUPT4H1P63272 117 aaKnown RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 SORDQ00796 357 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 RBPJQ06330 500 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 DYRK1AQ13627 763 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 GNMTQ14749 295 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF146Q15072 292 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 SF3B4Q15427 424 aaKnown RBP eCLIP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 OR8G1Q15617 311 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF718Q3SXZ3 478 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 ZNF672Q499Z4 452 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 IGSF11Q5DX21 431 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 LY6G6FQ5SQ64 297 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 STUMQ69YW2 141 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 RAB12Q6IQ22 244 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 C11orf87Q6NUJ2 197 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 HOGA1Q86XE5 327 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 FAM219AQ8IW50 185 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 FAM58AQ8N1B3 248 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 C11orf42Q8N5U0 333 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 ARL6IP6Q8N6S5 226 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 PNLDC1Q8NA58 520 aaKnown RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 TMEM229BQ8NBD8 167 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 TMEM116Q8NCL8 245 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 OR2Z1Q8NG97 314 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 ANGPTL6Q8NI99 470 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 SETD6Q8TBK2 473 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 LRRC29Q8WV35 223 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 RDH5Q92781 318 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 RAB3CQ96E17 227 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 ELMOD3Q96FG2 381 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 S100A16Q96FQ6 103 aaKnown RBP4.84□□□□□ -1.63
ATXN3-230ENST00000554673 GAFA1Q96PS6 74 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 BCL2L14Q9BZR8 327 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 METTL9Q9H1A3 318 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 CXXC4Q9H2H0 198 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 Q9N2K0 584 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 TMEM100Q9NV29 134 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 C1orf123Q9NWV4 160 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 ZNRD1Q9P1U0 126 aa4.84□□□□□ -1.63
ATXN3-230ENST00000554673 USP9YO00507 2555 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-230ENST00000554673 CSMD2Q7Z408 3487 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 A0A0A6YYH2 397 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 A6NJ64 397 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 ANKRD30BLA7E2S9 258 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 C17orf100A8MU93 164 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 C15orf65H3BRN8 121 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 ARPC1BO15143 372 aaKnown RBP4.83□□□□□ -1.64
ATXN3-230ENST00000554673 PLXNB1O43157 2135 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 CA11O75493 328 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 NDUFB6O95139 128 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 CLDN14O95500 239 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 CRYAAP02489 173 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 ERCC1P07992 297 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-230ENST00000554673 OCMP0CE72 109 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-230ENST00000554673 UBBP0CG47 229 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 AGAP20933 346 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 PTAFRP25105 342 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 GLIPR1P48060 266 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 KLF3P57682 345 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-230ENST00000554673 SEC61A1P61619 476 aaKnown RBP4.83□□□□□ -1.64
ATXN3-230ENST00000554673 CCL8P80075 99 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 SCN1BQ07699 218 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 EIF4EBP1Q13541 118 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-230ENST00000554673 RSU1Q15404 277 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 FCN2Q15485 313 aa4.83□□□□□ -1.64
ATXN3-230ENST00000554673 EFNB3Q15768 340 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms