RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HHLA2Q9UM44 414 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 SLC7A11Q9UPY5 501 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 A0A1B0GUS0 222 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 DAPL1A0PJW8 107 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 MEX3AA1L020 520 aaKnown RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 MEIOCA2RUB1 952 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 CLPSL1A2RUU4 121 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 SNTNA6NMZ2 147 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 ODF3BA8MYP8 253 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 H0YAE9 185 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 SLC1A7O00341 560 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 SPRY1O43609 319 aaPredicted RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 ANGPTL7O43827 346 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 MPZL2O60487 215 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 TSPAN9O75954 239 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 CLPXO76031 633 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 KDM4BO94953 1096 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 BAG2O95816 211 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 CLIC3O95833 236 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 CCDC159P0C7I6 412 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 LIMS3P0CW19 117 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 LIMS4P0CW20 117 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 PIPP12273 146 aaPredicted RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 PRKACBP22694 351 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 COX7A1P24310 79 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 EEF1B2P24534 225 aaKnown RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 PAX6P26367 422 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 OR3A1P47881 315 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 ATP1B3P54709 279 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 SNU13P55769 128 aaKnown RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 ERVFC1-1P60608 527 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 RPL31P62899 125 aaKnown RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 RAB40BQ12829 278 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 MRPL28Q13084 256 aaKnown RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 PDZK1IP1Q13113 114 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 IL18R1Q13478 541 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF146Q15072 292 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 LRRC75BQ2VPJ9 315 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 LDLRAD2Q5SZI1 272 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF691Q5VV52 312 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 LPCAT4Q643R3 524 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 XAF1Q6GPH4 301 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 SPSB3Q6PJ21 355 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 GDPGP1Q6ZNW5 385 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 C17orf107Q6ZR85 190 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 LHFPL3Q86UP9 236 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 Q8IYB0 196 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 C10orf67Q8IYJ2 551 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 OR8H2Q8N162 312 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 FAM58AQ8N1B3 248 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 ZSCAN4Q8NAM6 433 aaPredicted RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 OR4S1Q8NGB4 309 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 OR51A2Q8NGJ7 313 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 OR5D13Q8NGL4 314 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 OR13C3Q8NGS6 347 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 OR13C9Q8NGT0 318 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 CNIH3Q8TBE1 160 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 DYRK2Q92630 601 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 RFT1Q96AA3 541 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 SPSB1Q96BD6 273 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 FGGYQ96C11 551 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 SPACA5Q96QH8 159 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 CITED1Q99966 193 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 PDCD1LG2Q9BQ51 273 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 C1QTNF4Q9BXJ3 329 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 COMMD4Q9H0A8 199 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 DPAGT1Q9H3H5 408 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF696Q9H7X3 374 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 AMBNQ9NP70 447 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 SMPD3Q9NY59 655 aaPredicted RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 MDFICQ9P1T7 246 aa3.34□□□□□ -1.87
VTI1B-203ENST00000554636 CAB39Q9Y376 341 aaPredicted RBP3.34□□□□□ -1.87
VTI1B-203ENST00000554636 A0A087WYN8 130 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 IGHV4-28A0A0C4DH34 117 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 A0A1W2PPH5 198 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 BTBD17A6NE02 478 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 TMEM212A6NML5 194 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 H3BUX3 64 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 SIRPB1O00241 398 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 GABRPO00591 440 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 TIMM23O14925 209 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 CASQ2O14958 399 aaPredicted RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 SULT1B1O43704 296 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 CHST1O43916 411 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 FADS2O95864 444 aaKnown RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 PAHP00439 452 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 LALBAP00709 142 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 SERPINA3P01011 423 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 RBP4P02753 201 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 CRYBA1P05813 215 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF728P0DKX0 622 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 IGHV1-8P0DP01 117 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 CALCBP10092 127 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 PRKACAP17612 351 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ERP29P30040 261 aaKnown RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 RBP2P50120 134 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ETV1P50549 477 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 GTF2A1P52655 376 aaPredicted RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 GBX2P52951 348 aaPredicted RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 MTCP1P56278 107 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms