RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SNRNP40Q96DI7 357 aaKnown RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 RCHY1Q96PM5 261 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 P2RX4Q99571 388 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 PITX2Q99697 317 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 LMF2Q9BU23 707 aaKnown RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SNRNP25Q9BV90 132 aaKnown RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 RSPO3Q9BXY4 272 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 TMEM126AQ9H061 195 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 NXF5Q9H1B4 397 aaKnown RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 OR52D1Q9H346 318 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 A4GALTQ9NPC4 353 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 EXOSC4Q9NPD3 245 aaKnown RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 STARD5Q9NSY2 213 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 RBM22Q9NW64 420 aaKnown RBP eCLIP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF586Q9NXT0 402 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 WSB2Q9NYS7 404 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 RPS6KB2Q9UBS0 482 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 UQCR10Q9UDW1 63 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 PLEKHB1Q9UF11 243 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 PSORS1C1Q9UIG5 152 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 EXO1Q9UQ84 846 aaKnown RBP3.77□□□□□ -1.81
ATXN3-227ENST00000554491 RCE1Q9Y256 329 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 LAMTOR2Q9Y2Q5 125 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 SIGLEC9Q9Y336 463 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 HDGFL3Q9Y3E1 203 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 PPIAL4AQ9Y536 164 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ENPP4Q9Y6X5 453 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 CSMD1Q96PZ7 3565 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 MED13Q9UHV7 2174 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 ANAPC1Q9H1A4 1944 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 NAV3Q8IVL0 2385 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 KNL1Q8NG31 2342 aa3.77□□□□□ -1.81
ATXN3-227ENST00000554491 MED13LQ71F56 2210 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 ABCA2Q9BZC7 2435 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 IGHV1-69-2A0A0G2JMI3 117 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 FEZF1A0PJY2 475 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 PRSS37A4D1T9 235 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 TMEM189A5PLL7 270 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 NAP1L6A6NFF2 107 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 F5H5T6 163 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 F5H768 121 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 H7BYZ3 331 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 RAB27BO00194 218 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 SDHDO14521 159 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 PTGESO14684 152 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 HSD17B6O14756 317 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 DEGS1O15121 323 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 SLC31A1O15431 190 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 ERI3O43414 337 aaKnown RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 MPZL2O60487 215 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 HAND1O96004 215 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CST1P01037 141 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CHRM4P08173 479 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 WNT2P09544 360 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 TRGC1P0CF51 173 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 PGA3P0DJD8 388 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 C8orf88P0DMB2 117 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 HIST1H1EP10412 219 aaKnown RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 ARSAP15289 507 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 HOXB9P17482 250 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 EGR1P18146 543 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 PMCHP20382 165 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 USF1P22415 310 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 HIST1H1TP22492 207 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 ATP6V0CP27449 155 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 GABRA5P31644 462 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 FCGR2BP31994 310 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 UQCRFS1P47985 274 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 AMTP48728 403 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 GNG4P50150 75 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 DUSP3P51452 185 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CRADDP78560 199 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 TIAL1Q01085 375 aaKnown RBP eCLIP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CFHR3Q02985 330 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 DHRS2Q13268 280 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 P2RY6Q15077 328 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 HES3Q5TGS1 186 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 GFI1BQ5VTD9 330 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 NCBP2-AS2Q69YL0 99 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 SLC27A1Q6PCB7 646 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CNIH2Q6PI25 160 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 AGTRAPQ6RW13 159 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 TEX43Q6ZNM6 134 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 CLEC20AQ6ZU45 233 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF534Q76KX8 674 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 TSEN54Q7Z6J9 526 aaKnown RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 TMEM25Q86YD3 366 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 DEFB119Q8N690 84 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 ARL14EPQ8N8R7 260 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 LRRC75AQ8NAA5 344 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 C5orf17Q8NAS9 161 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 OR5D16Q8NGK9 328 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 OR10G4Q8NGN3 311 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 HAVCR2Q8TDQ0 301 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 IL22RA2Q969J5 263 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 MUCL1Q96DR8 90 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 MMABQ96EY8 250 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-227ENST00000554491 OR6C1Q96RD1 312 aa3.76□□□□□ -1.81
ATXN3-227ENST00000554491 RAB40CQ96S21 281 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms