RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 RPEQ96AT9 228 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 TLCD1Q96CP7 247 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 PPP3R2Q96LZ3 170 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 JSRP1Q96MG2 331 aaPredicted RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 ZFP3Q96NJ6 502 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 BIRC8Q96P09 236 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 SERPINI1Q99574 410 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 TIMM29Q9BSF4 260 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 DCUN1D5Q9BTE7 237 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 MND1Q9BWT6 205 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 CCDC90BQ9GZT6 254 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 ILKAPQ9H0C8 392 aaPredicted RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 ARV1Q9H2C2 271 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 MIXL1Q9H2W2 232 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 ARMC7Q9H6L4 198 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 RHOFQ9HBH0 211 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 TMEM138Q9NPI0 162 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 SLC2A9Q9NRM0 540 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 GSKIPQ9P0R6 139 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 IFNKQ9P0W0 207 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 DHCR7Q9UBM7 475 aaKnown RBP1.51□□□□□ -2.17
VRK1-202ENST00000553683 ZNF391Q9UJN7 358 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 VPREB3Q9UKI3 123 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 SIGLEC9Q9Y336 463 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 C5orf42Q9H799 3197 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 PBRM1Q86U86 1689 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 ROBO1Q9Y6N7 1651 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 CFAP54Q96N23 3096 aa1.51□□□□□ -2.17
VRK1-202ENST00000553683 FASNP49327 2511 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 MAGI1Q96QZ7 1491 aaPredicted RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 CEP162Q5TB80 1403 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 MKI67P46013 3256 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 ABCB11O95342 1321 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 EPG5Q9HCE0 2579 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 BRCA2P51587 3418 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 TRAV8-7A0A075B6U6 113 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 IGHV1OR15-9A0A0B4J2B8 117 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 IGSF23A1L1A6 192 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SMCO3A2RU48 225 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 PRORSD1PA6NEY8 169 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SMIM9A6NGZ8 99 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SLC22A20A6NK97 555 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 FAM25AB3EWG3 89 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 FAM25CB3EWG5 89 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 FAM25GB3EWG6 89 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 F5H5T6 163 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 F5H768 121 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 TSTD3H0UI37 97 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 J3QLI3 93 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 DFFAO00273 331 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SULT1C2O00338 296 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 PLPP3O14495 311 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 TP53I11O14683 189 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 UBDO15205 165 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SLC19A2O60779 497 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SLC22A5O76082 557 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 FARS2O95363 451 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 TNFAIP8O95379 198 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 AIFM1O95831 613 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 ISG15P05161 165 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CTSLP07711 333 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CST2P09228 141 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 PET100P0DJ07 73 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 ZNF250P15622 560 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 IL1RNP18510 177 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 KITLGP21583 273 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CXCR1P25024 350 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 F2RP25116 425 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CASP1P29466 404 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SDC4P31431 198 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CD200P41217 278 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 NBL1P41271 181 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 RBM34P42696 430 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 SSR4P51571 173 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CDKN2DP55273 166 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 KLF3P57682 345 aaPredicted RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 RAB10P61026 200 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 UBE2KP61086 200 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 EMX2Q04743 252 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 C2orf80Q0P641 193 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 OR8G1Q15617 311 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 ATP6V1FQ16864 119 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 RPEL1Q2QD12 228 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 PLPPR5Q32ZL2 321 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 ACSM3Q53FZ2 586 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 RBM48Q5RL73 367 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 PPM1LQ5SGD2 360 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 TPRG1LQ5T0D9 272 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 AVPI1Q5T686 147 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SDHAF4Q5VUM1 108 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 UBE2UQ5VVX9 321 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 STUMQ69YW2 141 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 BRD3OSQ6XYD6 125 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SLC16A13Q7RTY0 426 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SLC36A1Q7Z2H8 476 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 MRPL52Q86TS9 123 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 UNC93AQ86WB7 457 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SLC30A8Q8IWU4 369 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 OR6V1Q8N148 313 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 METTL13Q8N6R0 699 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms